RNA–Protein interactions for RNA: ENST00000562940.6

MTHFSD-209, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 1 (best)

Gene MTHFSD, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-209ENST00000562940 OR52L1Q8NGH7 329 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 PAPOLBQ9NRJ5 636 aaKnown RBP12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 HDGFL3Q9Y3E1 203 aa12.85□□□□□ -0.35
MTHFSD-209ENST00000562940 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PTNP21246 168 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 FPR3P25089 353 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 SFTPDP35247 375 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PTDSS1P48651 473 aaKnown RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 SLC9A3P48764 834 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 ALDH3A2P51648 485 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 RPS3AP61247 264 aaKnown RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 RAC1P63000 192 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PPP1R8Q12972 351 aaKnown RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 LINC00303Q3SY05 128 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 ANKDD1AQ495B1 522 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 OGFRL1Q5TC84 451 aaPredicted RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 CHMP1BQ7LBR1 199 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 TSPYL5Q86VY4 417 aaPredicted RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 OR6S1Q8NH40 331 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 FAM46AQ96IP4 442 aaKnown RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 RDH12Q96NR8 316 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PRSS27Q9BQR3 290 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 SLC6A15Q9H2J7 730 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 ZDHHC11Q9H8X9 412 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 FKRPQ9H9S5 495 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 HRH3Q9Y5N1 445 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 CORINQ9Y5Q5 1042 aa12.84□□□□□ -0.35
MTHFSD-209ENST00000562940 CHD8Q9HCK8 2581 aa12.83□□□□□ -0.35
MTHFSD-209ENST00000562940 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 SEC14L5O43304 696 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 PIP5K1CO60331 668 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 GPR4P46093 362 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 CTBP2P56545 445 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 PRKCDQ05655 676 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 COX10Q12887 443 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 PGBD2Q6P3X8 592 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 OR5M1Q8NGP8 315 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 PFN4Q8NHR9 129 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 NEIL3Q8TAT5 605 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 TEX47Q8TBZ9 253 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 GTPBP3Q969Y2 492 aaKnown RBP12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 WBP1Q96G27 269 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 CNTNAP3BQ96NU0 1288 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 FEVQ99581 238 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 POTEKPQ9BYX7 375 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 UCK2Q9BZX2 261 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 NANSQ9NR45 359 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 ALKBH4Q9NXW9 302 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 SMPD3Q9NY59 655 aaPredicted RBP12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 USE1Q9NZ43 259 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
MTHFSD-209ENST00000562940 UNC119BA6NIH7 251 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 H3BN98 237 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 PDLIM1O00151 329 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 SULT2B1O00204 365 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 DNPH1O43598 174 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 ZIC3O60481 467 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 OR7A10O76100 309 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 RCBTB2O95199 551 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 OR6A2O95222 327 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 LYPD3O95274 346 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 THY1P04216 161 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 SLC35A1P78382 337 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 TSPAN31Q12999 210 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.364e-11■■■■■ 45.1
MTHFSD-209ENST00000562940 SEC23BQ15437 767 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 NADK2Q4G0N4 442 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 LPCAT4Q643R3 524 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 C1orf94Q6P1W5 598 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 ARHGAP11AQ6P4F7 1023 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 WDR88Q6ZMY6 472 aa12.82□□□□□ -0.36
MTHFSD-209ENST00000562940 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms