RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SUCNR1Q9BXA5 334 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SNHG12Q9BXW3 62 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SEC11CQ9BY50 192 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SLC29A3Q9BZD2 475 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ABCG5Q9H222 651 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 NOX3Q9HBY0 568 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 THSD1Q9NS62 852 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 VPS29Q9UBQ0 182 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 CRLS1Q9UJA2 301 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SERTAD3Q9UJW9 196 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 NDRG4Q9ULP0 352 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 TFR2Q9UP52 801 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 NCAPD2Q15021 1401 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 A0A087WWV3 80 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 A0A1B0GTI1 187 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SMCO3A2RU48 225 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 HYKKA2RU49 373 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ARL5CA6NH57 179 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 C9JVG2 144 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ACOT7O00154 380 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 UBFD1O14562 309 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 HNRNPDLO14979 420 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF749O43361 778 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 LAMTOR5O43504 91 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 FOXO3O43524 673 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 OR2T1O43869 369 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TYROBPO43914 113 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 MOSPD3O75425 235 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ATP6AP2O75787 350 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 FAM155BO75949 473 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CXCL14O95715 111 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 FGF19O95750 216 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 DDAH2O95865 285 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CYBBP04839 570 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 GKN3PP0CG01 181 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 MYF5P13349 255 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 HOXB6P17509 224 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ENGP17813 658 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SDC1P18827 310 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 F2RP25116 425 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 MMP12P39900 470 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CEACAM3P40198 252 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 RBM34P42696 430 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CSNK1A1P48729 337 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 AGTR2P50052 363 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 RAB28P51157 221 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 OR10A3P58181 314 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 HBA1P69905 142 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 BST1Q10588 318 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 PLA2G7Q13093 441 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 NFATC2Q13469 925 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SURF2Q15527 256 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TSNQ15631 228 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SGCBQ16585 318 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 NKPD1Q17RQ9 610 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 MESTQ5EB52 335 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM220Q6QAJ8 160 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SERPINA13PQ6UXR4 307 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CD300LDQ6UXZ3 194 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 MOB2Q70IA6 237 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 CCDC117Q8IWD4 279 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM156Q8N614 296 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SLC38A9Q8NBW4 561 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 BEST4Q8NFU0 473 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 RHEBL1Q8TAI7 183 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 M1APQ8TC57 530 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SLC2A12Q8TD20 617 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 RNASEH2CQ8TDP1 164 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 EDEM1Q92611 657 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 YIPF6Q96EC8 236 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 AURKBQ96GD4 344 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 KAZALD1Q96I82 304 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF583Q96ND8 569 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 G6PC3Q9BUM1 346 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TMPRSS13Q9BYE2 586 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TKTL2Q9H0I9 626 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SPHK2Q9NRA0 654 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 FBXO6Q9NRD1 293 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 PLEKHJ1Q9NW61 149 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 RBFOX1Q9NWB1 397 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 DUS2Q9NX74 493 aaKnown RBP4.77□□□□□ -1.65
UBE4A-203ENST00000545354 GPR83Q9NYM4 423 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 SLC9A2Q9UBY0 812 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 TPRKBQ9Y3C4 175 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 ENTPD2Q9Y5L3 495 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 DUSP10Q9Y6W6 482 aa4.77□□□□□ -1.65
UBE4A-203ENST00000545354 A0A087WUJ7 227 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 ZCWPW2A0A1B0GU75 182 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 EFCAB9A8MZ26 197 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 E7EWF7 191 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 AGRPO00253 132 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 DLGAP1O14490 977 aa4.76□□□□□ -1.65
UBE4A-203ENST00000545354 EIF1AYO14602 144 aaKnown RBP4.76□□□□□ -1.65
UBE4A-203ENST00000545354 PPP1R2P9O14990 202 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms