RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 KDM4EB2RXH2 506 aaPredicted RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 CXCL13O43927 109 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 ATP5HO75947 161 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 SYNGR4O95473 234 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 SERPINA1P01009 418 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 CRHP06850 196 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 ZNF239Q16600 458 aaKnown RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 ALG10BQ5I7T1 473 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 EEF1A1P5Q5VTE0 462 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 NCCRP1Q6ZVX7 275 aaPredicted RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 P4HA3Q7Z4N8 544 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 MRGPRGQ86SM5 289 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 CARM1Q86X55 608 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 C9orf106Q8NAJ2 232 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 ATP6V1C2Q8NEY4 427 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 OR4D11Q8NGI4 311 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 STK35Q8TDR2 534 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 GEMIN6Q8WXD5 167 aaKnown RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 OSTF1Q92882 214 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 SLC38A4Q969I6 547 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 SLC47A1Q96FL8 570 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 RNF122Q9H9V4 155 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 DCAF13Q9NV06 445 aaKnown RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 SELENONQ9NZV5 590 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 Q9UFV3 132 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 PACSIN3Q9UKS6 424 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 RNF6Q9Y252 685 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 TRAPPC4Q9Y296 219 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 TEX15Q9BXT5 2789 aa17.42■□□□□ 0.38
DDX55-207ENST00000540763 INTS1Q8N201 2190 aaKnown RBP17.42■□□□□ 0.38
DDX55-207ENST00000540763 ELOA3DA6NLF2 546 aaPredicted RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 CHP2O43745 196 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 TGM6O95932 706 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 IL18BPO95998 194 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 OPN1LWP04000 364 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 TFPIP10646 304 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 NCK1P16333 377 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 TCN1P20061 433 aaPredicted RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 DIO1P49895 249 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 RASSF2P50749 326 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 ELOA3BQ3SY89 546 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 ENTPD8Q5MY95 495 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 FAM156AQ8NDB6 213 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 ELOA3Q8NG57 546 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 OR10Q1Q8NGQ4 319 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 VANGL1Q8TAA9 524 aaPredicted RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 FNDC9Q8TBE3 224 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 SLC7A6OSQ96CW6 309 aaPredicted RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 TPD52L3Q96J77 140 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 GLRX2Q9NS18 164 aa17.41■□□□□ 0.38
DDX55-207ENST00000540763 ZNF629Q9UEG4 869 aaPredicted RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 UTP20O75691 2785 aaKnown RBP17.41■□□□□ 0.38
DDX55-207ENST00000540763 A0A087WUJ7 227 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 A0A1W2PNR3 127 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 TRAPPC13A5PLN9 417 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 SULT2B1O00204 365 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ARPC2O15144 300 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 GYG2O15488 501 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 NPIPB7O75200 414 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ZNF682O95780 498 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 MYBPHQ13203 477 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 IFI44LQ53G44 452 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 MTX3Q5HYI7 312 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 SLC43A2Q8N370 569 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ADAMTS16Q8TE57 1224 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 RNF128Q8TEB7 428 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 SDCCAG3Q96C92 435 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ZHX1-C8orf76Q96EF9 292 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 MPP4Q96JB8 637 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ARL5BQ96KC2 179 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 SFXN3Q9BWM7 321 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 SRXN1Q9BYN0 137 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 GP6Q9HCN6 339 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 ACTR3BQ9P1U1 418 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 CACNA1CQ13936 2221 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 DOPEY1Q5JWR5 2465 aa17.4■□□□□ 0.38
DDX55-207ENST00000540763 CPSF4LA6NMK7 179 aaKnown RBP17.39■□□□□ 0.37
DDX55-207ENST00000540763 FZD7O75084 574 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 RNF224P0DH78 156 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 TMIGD3P0DMS9 266 aaPredicted RBP17.39■□□□□ 0.37
DDX55-207ENST00000540763 THRBP10828 461 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 CTSSP25774 331 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 IDUAP35475 653 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 GTF2IRD2BQ6EKJ0 949 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 GTF2IRD2Q86UP8 949 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 RBM45Q8IUH3 476 aaKnown RBP17.39■□□□□ 0.37
DDX55-207ENST00000540763 NAXEQ8NCW5 288 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 POP5Q969H6 163 aaKnown RBP17.39■□□□□ 0.37
DDX55-207ENST00000540763 HSH2DQ96JZ2 352 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 NSMCE2Q96MF7 247 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 BTBD10Q9BSF8 475 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 TMEM43Q9BTV4 400 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 PRRG4Q9BZD6 226 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 OR11A1Q9GZK7 315 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 PLEKHB1Q9UF11 243 aaPredicted RBP17.39■□□□□ 0.37
DDX55-207ENST00000540763 UNC79Q9P2D8 2635 aa17.39■□□□□ 0.37
DDX55-207ENST00000540763 ZC3H12DA2A288 527 aaKnown RBP17.38■□□□□ 0.37
DDX55-207ENST00000540763 DVL2O14641 736 aa17.38■□□□□ 0.37
DDX55-207ENST00000540763 EIF1BO60739 113 aaKnown RBP17.38■□□□□ 0.37
DDX55-207ENST00000540763 AQP8O94778 261 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms