RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SCGB2A2Q13296 93 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 IMPG1Q17R60 797 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 HMGN2P46Q86SG4 172 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 BPIFB2Q8N4F0 458 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 SIGLECL1Q8N7X8 197 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 OR1K1Q8NGR3 316 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 C1orf147Q96MC9 270 aaPredicted RBP6.88□□□□□ -1.31
LRP6-204ENST00000540415 ZNF385AQ96PM9 386 aaKnown RBP6.88□□□□□ -1.31
LRP6-204ENST00000540415 TSSK3Q96PN8 268 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 CCDC106Q9BWC9 280 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 NELFAQ9H3P2 528 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 PIGUQ9H490 435 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 DUSP22Q9NRW4 184 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 ZNF275Q9NSD4 429 aaPredicted RBP6.88□□□□□ -1.31
LRP6-204ENST00000540415 ACSS1Q9NUB1 689 aaPredicted RBP6.88□□□□□ -1.31
LRP6-204ENST00000540415 ZCCHC3Q9NUD5 404 aaKnown RBP6.88□□□□□ -1.31
LRP6-204ENST00000540415 ACER3Q9NUN7 267 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 SH3BP4Q9P0V3 963 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 BAIAP2L1Q9UHR4 511 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 CCL27Q9Y4X3 112 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 CORINQ9Y5Q5 1042 aa6.88□□□□□ -1.31
LRP6-204ENST00000540415 TRAV20A0A0B4J274 112 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 IGHV2OR16-5A0A0B4J2B6 119 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ZC3H12DA2A288 527 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 SERTM1A2A2V5 107 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 OR6C65A6NJZ3 312 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 CCDC188H7C350 402 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 PLPP2O43688 288 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 EIF4E2O60573 245 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 FCMRO60667 390 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 PRSS23O95084 383 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 IGLV1-44P01699 117 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 TFP02787 698 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ENO1P06733 434 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 RYKP34925 604 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ALDH3B1P43353 468 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MAGEA8P43361 318 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 H3F3AP84243 136 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 PLAURQ03405 335 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 LCP2Q13094 533 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 SLC17A1Q14916 467 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MAD2L1BPQ15013 274 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 KIAA0040Q15053 153 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MAPK14Q16539 360 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 TSNAXIP1Q2TAA8 658 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 AVPI1Q5T686 147 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 KRT80Q6KB66 452 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 UGT2A3Q6UWM9 527 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ZNF771Q7L3S4 317 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 LRP11Q86VZ4 500 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ADGRG3Q86Y34 549 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 C1QL4Q86Z23 238 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 NUP37Q8NFH4 326 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 OR4F15Q8NGB8 312 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 OR5D16Q8NGK9 328 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ST8SIA1Q92185 356 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 BCL2L2Q92843 193 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 PPCDCQ96CD2 204 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 LRRC58Q96CX6 371 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ZHX1-C8orf76Q96EF9 292 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 AURKBQ96GD4 344 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 ALKBH3Q96Q83 286 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 STACQ99469 402 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MRPL37Q9BZE1 423 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 HOXD1Q9GZZ0 328 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 GSTO2Q9H4Y5 243 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 REEP4Q9H6H4 257 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 ZNF442Q9H7R0 627 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MID1IP1Q9NPA3 183 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 SERINC1Q9NRX5 453 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 DDX28Q9NUL7 540 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 GPATCH2Q9NW75 528 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 PDP1Q9P0J1 537 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 TMEM216Q9P0N5 145 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 MYEF2Q9P2K5 600 aaKnown RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 CRNNQ9UBG3 495 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 CHRNA9Q9UGM1 479 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 OPN4Q9UHM6 478 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 FBXO9Q9UK97 447 aaPredicted RBP6.87□□□□□ -1.31
LRP6-204ENST00000540415 SLC9A8Q9Y2E8 581 aa6.87□□□□□ -1.31
LRP6-204ENST00000540415 TMEM72A0PK05 275 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 DNAJC9-AS1A6NH13 148 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 TRIM49D1C9J1S8 452 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 PPIHO43447 177 aaKnown RBP6.86□□□□□ -1.31
LRP6-204ENST00000540415 SEC22BO75396 215 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 UPK3AO75631 287 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 RP2O75695 350 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 MPZL1O95297 269 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 HSPA4LO95757 839 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 FSHBP01225 129 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 ERCC1P07992 297 aaPredicted RBP6.86□□□□□ -1.31
LRP6-204ENST00000540415 SDC1P18827 310 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 IMPDH1P20839 514 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 MDKP21741 143 aaPredicted RBP6.86□□□□□ -1.31
LRP6-204ENST00000540415 SELENOPP49908 381 aa6.86□□□□□ -1.31
LRP6-204ENST00000540415 PKNOX1P55347 436 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms