RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 CADM2Q8N3J6 435 aa18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 TMEM19Q96HH6 336 aa18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 EBF4Q9BQW3 602 aa18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 NAA11Q9BSU3 229 aaPredicted RBP18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 CCDC28BQ9BUN5 200 aa18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 PAIP1Q9H074 479 aaKnown RBP18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 ESRP2Q9H6T0 727 aaKnown RBP18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 ZNF443Q9Y2A4 671 aaPredicted RBP18.58■□□□□ 0.56
PTP4A3-205ENST00000523147 DSPPQ9NZW4 1301 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 IGKV3D-15A0A087WSY6 115 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 TMEM72A0PK05 275 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 HMGB1P1B2RPK0 211 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 C5orf58C9J3I9 102 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 NR5A2O00482 541 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 EIF1BO60739 113 aaKnown RBP18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 FOSL1P15407 271 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 NCF2P19878 526 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 RGNQ15493 299 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 LRRC75A-AS1Q8N1F1 130 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 APH1AQ96BI3 265 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 POTEKPQ9BYX7 375 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 IFT52Q9Y366 437 aa18.57■□□□□ 0.56
PTP4A3-205ENST00000523147 A0A096LPI6 279 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 ZNF716A6NP11 495 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 CLOCKO15516 846 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 MRPL33O75394 65 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 CNOT4O95628 575 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 PLAUP00749 431 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 THBS1P07996 1170 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 MRPL19P49406 292 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 FADDQ13158 208 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 ZNF311Q5JNZ3 666 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 RNF220Q5VTB9 566 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 WBP2NLQ6ICG8 309 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 BLOC1S3Q6QNY0 202 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 TMEM171Q8WVE6 324 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 MUCL1Q96DR8 90 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 SPDL1Q96EA4 605 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 PERPQ96FX8 193 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 PRDM4Q9UKN5 801 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 VPS13CQ709C8 3753 aa18.56■□□□□ 0.56
PTP4A3-205ENST00000523147 IGHV3-9P01782 118 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 CD3EP07766 207 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 GGT1P19440 569 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 Q5PR19 223 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 FBXW9Q5XUX1 488 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 AKAP1Q92667 903 aaKnown RBP eCLIP18.55■□□□□ 0.564e-7■□□□□ 8.7
PTP4A3-205ENST00000523147 MAL2Q969L2 176 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 SPATA9Q9BWV2 254 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 ADAM19Q9H013 955 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 A4GALTQ9NPC4 353 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 RNF115Q9Y4L5 304 aa18.55■□□□□ 0.56
PTP4A3-205ENST00000523147 CIB4A0PJX0 185 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 CCT8L1PA6NM43 557 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 HS3ST1O14792 307 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 GPIP06744 558 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 NUDT7P0C024 238 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 IMPDH2P12268 514 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 IGHV1-2P23083 117 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 EDNRAP25101 427 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 IDUAP35475 653 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 ACAA2P42765 397 aaKnown RBP18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 SLC16A1P53985 500 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 IRX1P78414 480 aaPredicted RBP18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 PPA1Q15181 289 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 AGKQ53H12 422 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 FUNDC1Q8IVP5 155 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 CLIP4Q8N3C7 705 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 BBS10Q8TAM1 723 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 TMEM204Q9BSN7 226 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 VIPAS39Q9H9C1 493 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 PARPBPQ9NWS1 579 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 ASB6Q9NWX5 421 aa18.54■□□□□ 0.56
PTP4A3-205ENST00000523147 SETD2Q9BYW2 2564 aaPredicted RBP18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 ZNF469Q96JG9 3925 aaPredicted RBP18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 ZC3H12DA2A288 527 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 PPIBP23284 216 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 ADSLP30566 484 aaPredicted RBP18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 H3F3AP84243 136 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 CEACAM7Q14002 265 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 OR7A5Q15622 319 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 FREM1Q5H8C1 2179 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 TIMM23BQ5SRD1 257 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 NCMAPQ5T1S8 102 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 PRAMEF8Q5VWM4 474 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 PRAMEF7Q5VXH5 474 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 CASP12Q6UXS9 341 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 SSX8Q7RTT4 187 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 P2RY8Q86VZ1 359 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 ZNF611Q8N823 705 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 C18orf12Q96KH6 178 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 MAGEB18Q96M61 343 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 TAPBPLQ9BX59 468 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 RABEP2Q9H5N1 569 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 CXorf56Q9H5V9 222 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 BCL2L10Q9HD36 194 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 UPB1Q9UBR1 384 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 SLC9A8Q9Y2E8 581 aa18.53■□□□□ 0.56
PTP4A3-205ENST00000523147 A8MVM7 634 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms