RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 C20orf204Q6ZNR8 217 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 BHLHA15Q7RTS1 189 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SSX8Q7RTT4 187 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 NUFIP2Q7Z417 695 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 VRK2Q86Y07 508 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 HSD17B8Q92506 261 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 MAL2Q969L2 176 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 S100PBPQ96BU1 408 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PSD2Q9BQI7 771 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SPATA9Q9BWV2 254 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 OR11A1Q9GZK7 315 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PAIP1Q9H074 479 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 OR10A4Q9H209 315 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ESRP2Q9H6T0 727 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 RLIMQ9NVW2 624 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 UPB1Q9UBR1 384 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 LEF1Q9UJU2 399 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 OSGIN1Q9UJX0 560 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PRDM4Q9UKN5 801 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 TRAPPC4Q9Y296 219 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SLC9A8Q9Y2E8 581 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 NDUFAF1Q9Y375 327 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 A0A1W2PP18 115 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM72A0PK05 275 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 FAAHO00519 579 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 DNAJA2O60884 412 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-232ENST00000489053 LYZL6O75951 148 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 ATE1O95260 518 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 AHSA1O95433 338 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 CD3EP07766 207 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 CD99P14209 185 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 ETS2P15036 469 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 GGT1P19440 569 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 RPS4Y1P22090 263 aaKnown RBP8.11□□□□□ -1.11
HDAC6-232ENST00000489053 OR3A2P47893 321 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 MRPL19P49406 292 aaKnown RBP8.11□□□□□ -1.11
HDAC6-232ENST00000489053 CDK6Q00534 326 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 NFYCQ13952 458 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 OR7A5Q15622 319 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 MMEL1Q495T6 779 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 SFRP5Q5T4F7 317 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 KLHL24Q6TFL4 600 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 Q6ZT83 130 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 DHDDSQ86SQ9 333 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 GPAT4Q86UL3 456 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 ADGRG3Q86Y34 549 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 BHLHE22Q8NFJ8 381 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-232ENST00000489053 NFKBIDQ8NI38 313 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 PLPPR2Q96GM1 343 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 POTEKPQ9BYX7 375 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 SLC6A13Q9NSD5 602 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 BEX4Q9NWD9 120 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-232ENST00000489053 ABCA4P78363 2273 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 KIAA1549Q9HCM3 1950 aa8.11□□□□□ -1.11
HDAC6-232ENST00000489053 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 A8MVM7 634 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 DEFB108AA8MXU0 73 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 EDF1O60869 148 aaKnown RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 PGM3O95394 542 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 CNOT4O95628 575 aaKnown RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 IGHV3-9P01782 118 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 C1QCP02747 245 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 NUDT7P0C024 238 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 AQP1P29972 269 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 PRKAR1BP31321 381 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 RGS8P57771 180 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 TGFBR3Q03167 851 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 CEACAM7Q14002 265 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 SCARB2Q14108 478 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 PDK3Q15120 406 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 MAPRE2Q15555 327 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ACKR1Q16570 336 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 LRIF1Q5T3J3 769 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 FBXW9Q5XUX1 488 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 AP1ARQ63HQ0 302 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM225Q6GV28 225 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ABLIM2Q6H8Q1 611 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 KLHL17Q6TDP4 642 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF704Q6ZNC4 412 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ABHD12BQ7Z5M8 362 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 SERPINA11Q86U17 422 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 RANBP3LQ86VV4 465 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 C11orf65Q8NCR3 313 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 SLC26A7Q8TE54 656 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 MBD6Q96DN6 1003 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ARL5BQ96KC2 179 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF300Q96RE9 604 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 TRIM2Q9C040 744 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 CXorf56Q9H5V9 222 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 PLEKHF2Q9H8W4 249 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM27Q9HBJ8 222 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms