RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 NR2F1P10589 423 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TFPIP10646 304 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 FKBP2P26885 142 aaKnown RBP10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TACR3P29371 465 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 SLC1A3P43003 542 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 MRPL19P49406 292 aaKnown RBP10.55□□□□□ -0.72
PTPRF-211ENST00000467464 POLR2HP52434 150 aaKnown RBP10.55□□□□□ -0.72
PTPRF-211ENST00000467464 KRTAP1-1Q07627 177 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 PPA1Q15181 289 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 GSTA3Q16772 222 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TIMM23BQ5SRD1 257 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 FBXW9Q5XUX1 488 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF836Q6ZNA1 936 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 PIGXQ8TBF5 258 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 ZBTB18Q99592 522 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 RSPO3Q9BXY4 272 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-211ENST00000467464 AMBRA1Q9C0C7 1298 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TPT1P8Q9HAU6 139 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 EMC3Q9P0I2 261 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TMEM181Q9P2C4 612 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 LAMP3Q9UQV4 416 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 FLVCR1Q9Y5Y0 555 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 CFAP73A6NFT4 308 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 OR5H1A6NKK0 313 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 UBDO15205 165 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 CLOCKO15516 846 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 KRT75O95678 551 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 BCHEP06276 602 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 DBIP07108 87 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 CD3EP07766 207 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ITGA5P08648 1049 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 GKN3PP0CG01 181 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 PRG2P13727 222 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 GGT1P19440 569 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 CCNA2P20248 432 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 HTR3AP46098 478 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ANXA11P50995 505 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 OR2B6P58173 313 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 RPS4XP62701 263 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 SLC17A1Q14916 467 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 STK11Q15831 433 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 RPS26P11Q5JNZ5 115 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 RNF220Q5VTB9 566 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 NXNQ6DKJ4 435 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ZIC4Q8N9L1 334 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 SLC38A5Q8WUX1 472 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 FBXW5Q969U6 566 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 BDH2Q9BUT1 245 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 PAIP1Q9H074 479 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ESRP2Q9H6T0 727 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 SLC52A3Q9NQ40 469 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 NKIRAS1Q9NYS0 192 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 P2RX2Q9UBL9 471 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF443Q9Y2A4 671 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 MAGED1Q9Y5V3 778 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 SLC25A15Q9Y619 301 aa10.54□□□□□ -0.72
PTPRF-211ENST00000467464 NSD1Q96L73 2696 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-211ENST00000467464 GPR171O14626 319 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
PTPRF-211ENST00000467464 NUDT7P0C024 238 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 BMP2P12643 396 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 IL7RP16871 459 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 P2RY4P51582 365 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 POLR2JP52435 117 aaKnown RBP10.53□□□□□ -0.72
PTPRF-211ENST00000467464 ATP5J2P56134 94 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 DSTNP60981 165 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 SLC25A3Q00325 362 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 SPOCK1Q08629 439 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 LIN52Q52LA3 116 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 PAQR6Q6TCH4 344 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 DNM1P46Q6ZS02 220 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 P2RY8Q86VZ1 359 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 FUNDC1Q8IVP5 155 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 MSRB3Q8IXL7 192 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 PEX5LQ8IYB4 626 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 C10orf111Q8N326 155 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 CLIP4Q8N3C7 705 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 WDR31Q8NA23 367 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 OR52E4Q8NGH9 312 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 OR52P1PQ8NH57 321 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-211ENST00000467464 APH1AQ96BI3 265 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 DDIT4LQ96D03 193 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 ZHX1-C8orf76Q96EF9 292 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 TMEM19Q96HH6 336 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 ITCHQ96J02 903 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 TRAF4Q9BUZ4 470 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-211ENST00000467464 NGBQ9NPG2 151 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 SLC25A37Q9NYZ2 338 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 PCDHB14Q9Y5E9 798 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 USH1CQ9Y6N9 552 aa10.53□□□□□ -0.72
PTPRF-211ENST00000467464 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms