RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TADA1Q96BN2 335 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 CCDC126Q96EE4 140 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 ELMOD3Q96FG2 381 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 NPAS2Q99743 824 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 SRSF8Q9BRL6 282 aaKnown RBP4.6□□□□□ -1.67
EPHA3-202ENST00000452448 THAP7Q9BT49 309 aaPredicted RBP4.6□□□□□ -1.67
EPHA3-202ENST00000452448 IL22Q9GZX6 179 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 CRISPLD1Q9H336 500 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 C1orf198Q9H425 327 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 KCNK9Q9NPC2 374 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 FAM49BQ9NUQ9 324 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 C2orf42Q9NWW7 574 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 KCNK4Q9NYG8 393 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 PLA2G3Q9NZ20 509 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 RNF14Q9UBS8 474 aa4.6□□□□□ -1.67
EPHA3-202ENST00000452448 TMEM184BQ9Y519 407 aaPredicted RBP4.6□□□□□ -1.67
EPHA3-202ENST00000452448 PRSS38A1L453 326 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 GLOD5A6NK44 160 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ANKRD66B4E2M5 251 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ANKRD28O15084 1053 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 WNT11O96014 354 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ACTL6AO96019 429 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 IGHV2-5P01817 119 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 GBAP04062 536 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CYBBP04839 570 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 MTHFD2P13995 350 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 TPSB2P20231 275 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ACP1P24666 158 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CNR2P34972 360 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 LIPAP38571 399 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 OR3A1P47881 315 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CSNK1A1P48729 337 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CYB561P49447 251 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CDH12P55289 794 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 RAG2P55895 527 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 FGFBP1Q14512 234 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 SF3A2Q15428 464 aaKnown RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 SPA17Q15506 151 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 TPSAB1Q15661 275 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 KHDC1LQ5JSQ8 128 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 PHF19Q5T6S3 580 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 AGBL4Q5VU57 503 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 GADL1Q6ZQY3 521 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ATG4DQ86TL0 474 aaPredicted RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CCDC190Q86UF4 302 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 PIGXQ8TBF5 258 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 PHF10Q8WUB8 498 aaKnown RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 NUDT8Q8WV74 236 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 SORCS2Q96PQ0 1159 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 F2RL3Q96RI0 385 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CSF3RQ99062 836 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CHRDL1Q9BU40 450 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 DPCDQ9BVM2 203 aaPredicted RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ZNF436Q9C0F3 470 aaPredicted RBP4.59□□□□□ -1.67
EPHA3-202ENST00000452448 DSN1Q9H410 356 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ZDHHC6Q9H6R6 413 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 HEXA-AS1Q9H8Q6 139 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 LYRM4Q9HD34 91 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 HRASLSQ9HDD0 168 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 G6PC2Q9NQR9 355 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 GPR27Q9NS67 375 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 ANGPT4Q9Y264 503 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 LIPGQ9Y5X9 500 aa4.59□□□□□ -1.67
EPHA3-202ENST00000452448 CNTNAP5Q8WYK1 1306 aa4.59□□□□□ -1.68
EPHA3-202ENST00000452448 DOCK2Q92608 1830 aa4.59□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM233B4DJY2 109 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 WNT9AO14904 365 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NARSO43776 548 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 NRP2O60462 931 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 OR8U9P0C7N5 309 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 BMP7P18075 431 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 IL1RNP18510 177 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CD72P21854 359 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CD40P25942 277 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TNFSF10P50591 281 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 JAK3P52333 1124 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CLDN18P56856 261 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 EEFSECP57772 596 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TAS2R41P59536 307 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 UBE2KP61086 200 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TFAMQ00059 246 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MXD1Q05195 221 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZFP36L1Q07352 338 aaKnown RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 MALLQ13021 153 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 GUCA2BQ16661 112 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 CARD16Q5EG05 197 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF789Q5FWF6 425 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 DHRS7BQ6IAN0 325 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 INO80CQ6PI98 192 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 FCRLAQ7L513 359 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 C10orf107Q8IVU9 208 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 LYG1Q8N1E2 194 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM116Q8NCL8 245 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 OR4F15Q8NGB8 312 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 GRAPLQ8TC17 118 aaPredicted RBP4.58□□□□□ -1.68
EPHA3-202ENST00000452448 SLC2A12Q8TD20 617 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 RNF133Q8WVZ7 376 aa4.58□□□□□ -1.68
EPHA3-202ENST00000452448 BPIFA2Q96DR5 249 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms