RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 Q3ZCU0 254 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PARP15Q460N3 678 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LBHQ53QV2 105 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CLLU1Q5K131 121 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 OTUD3Q5T2D3 398 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 STPG1Q5TH74 334 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RUSC1-AS1Q66K80 236 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF470Q6ECI4 717 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMEM270Q6UE05 265 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SCARA5Q6ZMJ2 495 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMPRSS11AQ6ZMR5 421 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF600Q6ZNG1 722 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMEM182Q6ZP80 229 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 C1orf186Q6ZWK4 172 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 TRMT1LQ7Z2T5 733 aaKnown RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDH26Q8IXH8 852 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LRRC17Q8N6Y2 441 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR10Q1Q8NGQ4 319 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ELMO1Q92556 727 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMEM143Q96AN5 459 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CREB3L1Q96BA8 519 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 C19orf60Q96EN9 201 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SGTBQ96EQ0 304 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF170Q96K19 258 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LMLNQ96KR4 655 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ART5Q96L15 291 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PPP3R2Q96LZ3 170 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LXNQ9BS40 222 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PDCD10Q9BUL8 212 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 BBS2Q9BXC9 721 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ROGDIQ9GZN7 287 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CPVLQ9H3G5 476 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 C8orf33Q9H7E9 229 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF121Q9H920 327 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LMAN1LQ9HAT1 526 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 FOLH1BQ9HBA9 442 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CHST11Q9NPF2 352 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 IFT46Q9NQC8 304 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 HPF1Q9NWY4 346 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBAKQ9NYW8 714 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CCDC167Q9P0B6 97 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SEC14L4Q9UDX3 406 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 KIF25Q9UIL4 384 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LEF1Q9UJU2 399 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ICAM5Q9UMF0 924 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ABCG2Q9UNQ0 655 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 DIMT1Q9UNQ2 313 aaKnown RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PLCL2Q9UPR0 1127 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 BTRCQ9Y297 605 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 KLF2Q9Y5W3 355 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 FKBP7Q9Y680 259 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 COL11A1P12107 1806 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SCN8AQ9UQD0 1980 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ANK1P16157 1881 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PARP14Q460N5 1801 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 IGHV4-61A0A0C4DH41 118 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A0G2JMP0 313 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A0J9YYE9 177 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LOC100130705A0A1B0GUX0 176 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A1B0GVI7 797 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM149AA5PLN7 773 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SMIM1B2RUZ4 78 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 F8W036 122 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 G3V2L1 256 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NME4O00746 187 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 DLGAP1O14490 977 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SDHDO14521 159 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 MYL12BO14950 172 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CHMP2AO43633 222 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 FCGR3BO75015 233 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LRCH4O75427 683 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PSIP1O75475 530 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CRCPO75575 148 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PIAS1O75925 651 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 LYPLA2O95372 231 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CLIC3O95833 236 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NDUFB10O96000 172 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GOT2P00505 430 aaKnown RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SERPINA1P01009 418 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 IGHV4-59P01825 116 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 C1QAP02745 245 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 RLN1P04808 185 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 IFNA4P05014 189 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ANXA3P12429 323 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 GP1BBP13224 206 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ICAM2P13598 275 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 NCF1P14598 390 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 MYL12AP19105 171 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 TNNI1P19237 187 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 PCMT1P22061 227 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 ITGA3P26006 1051 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 AXLP30530 894 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 OXTRP30559 389 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CEACAM8P31997 349 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDH5P33151 784 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 SHMT2P34897 504 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 EVI2BP34910 448 aa3.94□□□□□ -1.78
HMGB1P16-201ENST00000447155 HMGCLP35914 325 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms