RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 FNTBP49356 437 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 ELOCQ15369 112 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC25A35Q3KQZ1 300 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 HBMQ6B0K9 141 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 SAMD12Q8N8I0 201 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF615Q8N8J6 731 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 SCAIQ8N9R8 606 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 RASD2Q96D21 266 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 WACQ9BTA9 647 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 ENAMQ9NRM1 1142 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 PNO1Q9NRX1 252 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 CLEC4AQ9UMR7 237 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 A0A087WUJ7 227 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 FAM171A2A8MVW0 826 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 EIF4EP06730 217 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 ERVK-25P63136 954 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 SKP1P63208 163 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 FUT7Q11130 342 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 QPRTQ15274 297 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 ACSM3Q53FZ2 586 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 MED25Q71SY5 747 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 OR6C4Q8NGE1 309 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 TMEM43Q9BTV4 400 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 NLKQ9UBE8 527 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 SERTAD3Q9UJW9 196 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 C17orf105B2RV13 164 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 OIP5O43482 229 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 SOX30O94993 753 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 CFL1P23528 166 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 CD1CP29017 333 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 FASLGP48023 281 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 GABRA4P48169 554 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 INPP1P49441 399 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 GPR143P51810 404 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 CD226Q15762 336 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF57Q68EA5 555 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 SFXN4Q6P4A7 337 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 SYT13Q7L8C5 426 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 C3orf49Q96BT1 292 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 LMAN1LQ9HAT1 526 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 HAO2Q9NYQ3 351 aa16.82■□□□□ 0.28
SHKBP1-201ENST00000291842 PSMD9O00233 223 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 LYRM1O43325 122 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 SELENOFO60613 162 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC19A2O60779 497 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 CLPSP04118 112 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ALAS2P22557 587 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 THBS2P35442 1172 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 OR1D4P47884 311 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PRAMEF17Q5VTA0 474 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 DMKNQ6E0U4 476 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 METAP1DQ6UB28 335 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PLET1Q6UQ28 207 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PAMR1Q6UXH9 720 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 OR4M1Q8NGD0 313 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 OR6K6Q8NGW6 343 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 FYTTD1Q96QD9 318 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 RANGRFQ9HD47 186 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ADAM30Q9UKF2 790 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 CA14Q9ULX7 337 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PLCL2Q9UPR0 1127 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PCDHGB7Q9Y5F8 929 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 MPDZO75970 2070 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 SEC16AO15027 2179 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 A0A0B4J203 849 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 HMX3A6NHT5 357 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 BLOC1S5-TXNDC5H3BN57 136 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 LANCL1O43813 399 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 CD38P28907 300 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 GRPRP30550 384 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 HOXD12P35452 270 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 RPS5P46782 204 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ZFP69Q49AA0 526 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 TMEM53Q6P2H8 277 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 CBLN3Q6UW01 205 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ASB18Q6ZVZ8 466 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 MOSPD2Q8NHP6 518 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 DNAJA3Q96EY1 480 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 PELI1Q96FA3 418 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 KLHDC3Q9BQ90 382 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 TTYH2Q9BSA4 534 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 HDHD2Q9H0R4 259 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ST6GALNAC2Q9UJ37 374 aa16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF346Q9UL40 294 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-201ENST00000291842 FAM240BA0A1B0GVZ2 78 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 OR6C68A6NDL8 312 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 EFCAB7A8K855 629 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF749O43361 778 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 IDH3BO43837 385 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 PRKAR1AP10644 381 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 GLULP15104 373 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 PSMB10P40306 273 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ACTC1P68032 377 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ACTA1P68133 377 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 CD83Q01151 205 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 TTLL10Q6ZVT0 673 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 C10orf53Q8N6V4 93 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ZSCAN1Q8NBB4 408 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms