RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HSD3B2P26439 372 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 MAPK8P45983 427 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
SCARB2-227ENST00000640957 CRMP1Q14194 572 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 SLC44A3Q8N4M1 653 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 GIMAP5Q96F15 307 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 UBL7Q96S82 380 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-227ENST00000640957 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 TM7SF3Q9NS93 570 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 ASF1BQ9NVP2 202 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 WDR87Q6ZQQ6 2873 aa12.73□□□□□ -0.37
SCARB2-227ENST00000640957 A0A1B0GTH9 108 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MT-ND5P03915 603 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SPP1P10451 314 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 RPL3P39023 403 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SSR2P43308 183 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MMP15P51511 669 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ID2Q02363 134 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 STX4Q12846 297 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SP140Q13342 867 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SWI5Q1ZZU3 235 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 METTL11BQ5VVY1 283 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TSPAN10Q9H1Z9 355 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 KLHL31Q9H511 634 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 NOX4Q9NPH5 578 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 KIF26AQ9ULI4 1882 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PRSS44E7EML9 344 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SELENOFO60613 162 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 IL9P15248 144 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 NDUFV2P19404 249 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 GSTM3P21266 225 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MC3RP41968 323 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ST8SIA6P61647 398 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TRAM2Q15035 370 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TEAD2Q15562 447 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SLC22A10Q63ZE4 541 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 B3GNTL1Q67FW5 361 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PUSL1Q8N0Z8 303 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PXT1Q8NFP0 134 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 CWH43Q9H720 699 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MED11Q9P086 117 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ACAD8Q9UKU7 415 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 OR5K4A6NMS3 321 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SULT1C2O00338 296 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 GRM6O15303 877 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MAKP20794 623 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MAOBP27338 520 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 C21orf58P58505 322 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 POLR2GP62487 172 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 RBM39Q14498 530 aaKnown RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TMEM69Q5SWH9 247 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 GDF7Q7Z4P5 450 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF761Q86XN6 746 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 MUC20Q8N307 709 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-227ENST00000640957 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TEAD3Q99594 435 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 ACTR6Q9GZN1 396 aa12.72□□□□□ -0.37
SCARB2-227ENST00000640957 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 PPP1R3DO95685 299 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.37
SCARB2-227ENST00000640957 TGM3Q08188 693 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 BAMBIQ13145 260 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 TAF13Q15543 124 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 OR7A5Q15622 319 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-227ENST00000640957 GLDNQ6ZMI3 551 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF620Q6ZNG0 422 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 LRRTM1Q86UE6 522 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-227ENST00000640957 SDR9C7Q8NEX9 313 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 SYNPRQ8TBG9 265 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 THEM6Q8WUY1 208 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 TEX12Q9BXU0 123 aa12.71□□□□□ -0.37
SCARB2-227ENST00000640957 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-227ENST00000640957 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 A0A0G2JPF8 293 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 VWA8A3KMH1 1905 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 C4orf47A7E2U8 309 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.38
SCARB2-227ENST00000640957 RASGRP1O95267 797 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 EDNRAP25101 427 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms