RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CEP295Q9C0D2 2601 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 PRR19A6NJB7 356 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 DLEU1O43261 78 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 SELENOFO60613 162 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 SLC34A2O95436 690 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 CER1O95813 267 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 MC3RP41968 323 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 TNFRSF17Q02223 184 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 C14orf28Q4W4Y0 310 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 PRAMEF17Q5VTA0 474 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 CYP4Z1Q86W10 505 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 PAQR7Q86WK9 346 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 WDR36Q8NI36 951 aaKnown RBP11.18□□□□□ -0.62
SRRT-216ENST00000618262 GLYATL2Q8WU03 294 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 WBP1Q96G27 269 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 COL21A1Q96P44 957 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 LYARQ9NX58 379 aaKnown RBP11.18□□□□□ -0.62
SRRT-216ENST00000618262 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 MOKQ9UQ07 419 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 CLCA3PQ9Y6N3 262 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 SUV39H1O43463 412 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 WBP4O75554 376 aaKnown RBP11.18□□□□□ -0.62
SRRT-216ENST00000618262 SPP1P10451 314 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 CD22P20273 847 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 IRF8Q02556 426 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 IRF3Q14653 427 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 OR8G1Q15617 311 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 SYT16Q17RD7 645 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 PRAMEF13Q5VWM6 474 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 STX19Q8N4C7 294 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 NUDT8Q8WV74 236 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 ZFYVE21Q9BQ24 234 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 DPH7Q9BTV6 452 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 ALOXE3Q9BYJ1 711 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
SRRT-216ENST00000618262 PNMA8CA0A1B0GUJ8 204 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 A8MXK9 166 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 C9JVG2 144 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 SOCS2O14508 198 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 KHDRBS3O75525 346 aaKnown RBP11.17□□□□□ -0.62
SRRT-216ENST00000618262 SERPINE1P05121 402 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 SNRPNP63162 240 aaKnown RBP11.17□□□□□ -0.62
SRRT-216ENST00000618262 HMGCS1Q01581 520 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 ADIPOQQ15848 244 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 MICBQ29980 383 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 CAPN13Q6MZZ7 669 aaPredicted RBP11.17□□□□□ -0.62
SRRT-216ENST00000618262 ADGRF3Q8IZF5 1079 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 MUL1Q969V5 352 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 BOD1Q96IK1 185 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 CCDC3Q9BQI4 270 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 HDHD2Q9H0R4 259 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 LRP4O75096 1905 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 PIEZO1Q92508 2521 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 A0A1W2PPV9 198 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 KDM4EB2RXH2 506 aaPredicted RBP11.17□□□□□ -0.62
SRRT-216ENST00000618262 AHSA1O95433 338 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 ANGPTL1O95841 491 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 IFNA10P01566 189 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 APOC3P02656 99 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 RPN2P04844 631 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 ALPPP05187 535 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 DTYMKP23919 212 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 MYL9P24844 172 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 LUMP51884 338 aaPredicted RBP11.17□□□□□ -0.62
SRRT-216ENST00000618262 THAP5Q7Z6K1 395 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 OR52N2Q8NGI0 321 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 FBXL20Q96IG2 436 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 SLC32A1Q9H598 525 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 BOD1L1Q8NFC6 3051 aa11.17□□□□□ -0.62
SRRT-216ENST00000618262 IGKV1-8A0A0C4DH67 115 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 OR10H3O60404 316 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 ONECUT2O95948 504 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 RPLP0P05388 317 aaKnown RBP11.16□□□□□ -0.62
SRRT-216ENST00000618262 HEXAP06865 529 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 PTGFRP43088 359 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 SNRPEP62304 92 aaKnown RBP11.16□□□□□ -0.62
SRRT-216ENST00000618262 CFHR1Q03591 330 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 HIKESHIQ53FT3 197 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 TM4SF20Q53R12 229 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 LPCAT3Q6P1A2 487 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 OR5D18Q8NGL1 313 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 OR2A1Q8NGT9 310 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 PEX11GQ96HA9 241 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 DMRTA2Q96SC8 542 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 POFUT1Q9H488 388 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 PCNX2A6NKB5 2137 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 KIR2DS5A0A0G2JLQ3 304 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 A0A0G2JNG1 304 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 SPAARA0A1B0GVQ0 90 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 KIR2DS3K7RE56 304 aa11.16□□□□□ -0.62
SRRT-216ENST00000618262 CLIC3O95833 236 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms