RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 C6orf10Q5SRN2 563 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 PDSS1Q5T2R2 415 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 BHLHB9Q6PI77 547 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 FUNDC1Q8IVP5 155 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 TRIML2Q8N7C3 387 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 SLC16A11Q8NCK7 471 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 FBXO30Q8TB52 745 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 MOAP1Q96BY2 351 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ZNF524Q96C55 264 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 GIMAP5Q96F15 307 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 C16orf58Q96GQ5 468 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 CCDC115Q96NT0 180 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 RHNO1Q9BSD3 238 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 BARX1Q9HBU1 254 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ZCCHC3Q9NUD5 404 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ARMCX1Q9P291 453 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 NDUFAF1Q9Y375 327 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 YLPM1P49750 1951 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 TTC36A6NLP5 189 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 OIP5O43482 229 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 SCN2BO60939 215 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 YES1P07947 543 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 IFI6P09912 130 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 PABPC4LP0CB38 370 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 ENPP1P22413 925 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 ME2P23368 584 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 CCT3P49368 545 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 SRSF2Q01130 221 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 FOXF1Q12946 379 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 P2RY6Q15077 328 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 DUSP5Q16690 384 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 MMEL1Q495T6 779 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 SLC2A7Q6PXP3 512 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 ZNF621Q6ZSS3 439 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 FCRLAQ7L513 359 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 BHLHA15Q7RTS1 189 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 NUP43Q8NFH3 380 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 OR56A1Q8NGH5 318 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 B4GALNT2Q8NHY0 566 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 TSPEARQ8WU66 669 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 HTRA1Q92743 480 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 OTUB1Q96FW1 271 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 LRRC37BQ96QE4 947 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 TNFRSF13CQ96RJ3 184 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 POTEKPQ9BYX7 375 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 CXorf36Q9H7Y0 433 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 NPAP1Q9NZP6 1156 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 NTMQ9P121 344 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 LEF1Q9UJU2 399 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 CDC42EP3Q9UKI2 254 aa14.55□□□□□ -0.08
SHKBP1-215ENST00000597649 LOC100653049A0A140TA62 436 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 LYZL6O75951 148 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 KRT34O76011 436 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 PRKD3O94806 890 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 UQCRC2P22695 453 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 CHI3L1P36222 383 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 TP53BP2Q13625 1128 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 CYLC2Q14093 348 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 TMEM176BQ3YBM2 270 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 CCNJQ5T5M9 372 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 C11orf71Q6IPW1 123 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 CDRT4Q8N9R6 151 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 PSMA8Q8TAA3 256 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 SFXN5Q8TD22 340 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 CPNE4Q96A23 557 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 ZNF775Q96BV0 537 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 REXO5Q96IC2 774 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 KCNK17Q96T54 332 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 INPP5KQ9BT40 448 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 ALG2Q9H553 416 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 COQ10BQ9H8M1 238 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 UBQLN4Q9NRR5 601 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 PRSS50Q9UI38 385 aa14.54□□□□□ -0.08
SHKBP1-215ENST00000597649 IGHV3-15A0A0B4J1V0 119 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 RNF103-CHMP3A0A140T963 221 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 E7EQL1 145 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 GSNP06396 782 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 FESP07332 822 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 RNF144AP50876 292 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 VLDLRP98155 873 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 LOXL1Q08397 574 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 PPA1Q15181 289 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 STK11Q15831 433 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 EXOSC6Q5RKV6 272 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 CBLN3Q6UW01 205 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 Q6ZT83 130 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 SNX32Q86XE0 403 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 ARIH2OSQ8N7S6 290 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 OR5AK3PQ8NH89 298 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 FBXO27Q8NI29 283 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 FAM120BQ96EK7 910 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 MS4A4EQ96PG1 132 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 USB1Q9BQ65 265 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 CCDC106Q9BWC9 280 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 BEX2Q9BXY8 128 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 MYLK2Q9H1R3 596 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 GP6Q9HCN6 339 aa14.53□□□□□ -0.08
SHKBP1-215ENST00000597649 TIGARQ9NQ88 270 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms