RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 POU2F3Q9UKI9 436 aa15.25■□□□□ 0.03
RETREG3-210ENST00000590541 MGAT4BQ9UQ53 548 aa15.25■□□□□ 0.03
RETREG3-210ENST00000590541 PRSS51A0A1B0GVH4 220 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 C9JVG2 144 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 SLCO1B7G3V0H7 640 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF195O14628 629 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 SPRY1O43609 319 aaPredicted RBP15.24■□□□□ 0.03
RETREG3-210ENST00000590541 AGR2O95994 175 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 HNF1AP20823 631 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 ATP12AP54707 1039 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 BST1Q10588 318 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 GGTLC2Q14390 218 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 KLHL26Q53HC5 615 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 CCNJQ5T5M9 372 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 MEX3DQ86XN8 651 aaKnown RBP15.24■□□□□ 0.03
RETREG3-210ENST00000590541 FBXO27Q8NI29 283 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 ZFP90Q8TF47 636 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF775Q96BV0 537 aaPredicted RBP15.24■□□□□ 0.03
RETREG3-210ENST00000590541 OR7D2Q96RA2 312 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 PAIP2Q9BPZ3 127 aaKnown RBP15.24■□□□□ 0.03
RETREG3-210ENST00000590541 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 KLHL9Q9P2J3 617 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 PLCE1Q9P212 2302 aa15.24■□□□□ 0.03
RETREG3-210ENST00000590541 TRPC5OSA6NMA1 111 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 GUSBP08236 651 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 MATN1P21941 496 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 PTAFRP25105 342 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 CD40P25942 277 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 CFPP27918 469 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 SOAT1P35610 550 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 P2RX1P51575 399 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 LRRC74AQ0VAA2 488 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 ATG16L1Q676U5 607 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 OR4F3Q6IEY1 312 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 C6orf120Q7Z4R8 191 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF433Q8N7K0 673 aaPredicted RBP15.23■□□□□ 0.03
RETREG3-210ENST00000590541 PHOSPHO1Q8TCT1 267 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF75CPQ92670 426 aaPredicted RBP15.23■□□□□ 0.03
RETREG3-210ENST00000590541 OTUB1Q96FW1 271 aaPredicted RBP15.23■□□□□ 0.03
RETREG3-210ENST00000590541 PPP1R36Q96LQ0 422 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF300Q96RE9 604 aaPredicted RBP15.23■□□□□ 0.03
RETREG3-210ENST00000590541 NUF2Q9BZD4 464 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 NMUR2Q9GZQ4 415 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 EXD2Q9NVH0 621 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 DTNAQ9Y4J8 743 aa15.23■□□□□ 0.03
RETREG3-210ENST00000590541 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 GJE1A6NN92 205 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 NPIPB9F8W1W9 429 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 GTPBP1O00178 669 aaKnown RBP15.22■□□□□ 0.03
RETREG3-210ENST00000590541 KIAA0513O60268 411 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 UQCRC2P22695 453 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF83P51522 516 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 RAC3P60763 192 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 ZNF117Q03924 483 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 SPATA19Q7Z5L4 167 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 RFLNBQ8N5W9 214 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 ANKRD42Q8N9B4 389 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 OR4A15Q8NGL6 344 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 OR52N5Q8NH56 324 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 SDF2Q99470 211 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 INPP5KQ9BT40 448 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 NKIRAS1Q9NYS0 192 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 SLC25A15Q9Y619 301 aa15.22■□□□□ 0.03
RETREG3-210ENST00000590541 GPC6Q9Y625 555 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-210ENST00000590541 IGHV4-61A0A0C4DH41 118 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 A0A1W2PNR3 127 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 A0A1W2PR80 420 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ANKRD28O15084 1053 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 SMAD9O15198 467 aaKnown RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 HDAC3O15379 428 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 KCNAB3O43448 404 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 OIP5O43482 229 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 TCF21O43680 179 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 EIF4E2O60573 245 aaKnown RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 CYTIPO60759 359 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 SCN2BO60939 215 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 SNNO75324 88 aaPredicted RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 STX11O75558 287 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 RAD51DO75771 328 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 APEHP13798 732 aaKnown RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ITGA2P17301 1181 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 NR4A2P43354 598 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 WDR4P57081 412 aaKnown RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 TXNL4AP83876 142 aaKnown RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 RASGEF1BQ0VAM2 473 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 CASP8Q14790 479 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 TOMM34Q15785 309 aaPredicted RBP15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ARHGAP11BQ3KRB8 267 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ATAD3BQ5T9A4 648 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 AP1ARQ63HQ0 302 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 CBLN3Q6UW01 205 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 CLECL1Q8IZS7 167 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 TOR1AIP2Q8NFQ8 470 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 ARL8AQ96BM9 186 aa15.21■□□□□ 0.03
RETREG3-210ENST00000590541 C3orf49Q96BT1 292 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms