RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TNFRSF17Q02223 184 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RIPPLY1Q0D2K3 151 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MAPRE2Q15555 327 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 OR4D1Q15615 310 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CEBPEQ15744 281 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MAPK11Q15759 364 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SYT16Q17RD7 645 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 DEFB134Q4QY38 66 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RUNDC3AQ59EK9 446 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 FAM91A1Q658Y4 838 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SFRP4Q6FHJ7 346 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MED27Q6P2C8 311 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 TMEM207Q6UWW9 146 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 TRMT10CQ7L0Y3 403 aaKnown RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 NDUFAF7Q7L592 441 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SLC46A3Q7Z3Q1 461 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 VN1R4Q7Z5H5 301 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 EXOC3L1Q86VI1 746 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 IQCKQ8N0W5 287 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MMP21Q8N119 569 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 AMER3Q8N944 861 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF740Q8NDX6 193 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SRFBP1Q8NEF9 429 aaKnown RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 BBS1Q8NFJ9 593 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 OR11G2Q8NGC1 345 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 OR51Q1Q8NH59 317 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RHEBL1Q8TAI7 183 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SUN3Q8TAQ9 357 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 NT5CQ8TCD5 201 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 KCTD4Q8WVF5 259 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 NR4A3Q92570 626 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MOAP1Q96BY2 351 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RHBDF1Q96CC6 855 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MTBPQ96DY7 904 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 REXO5Q96IC2 774 aaKnown RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CEP19Q96LK0 163 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 OR4K3Q96R72 315 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 OR1F2PQ96R84 312 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 LPAR4Q99677 370 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MACROD1Q9BQ69 325 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 INPP5KQ9BT40 448 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 NUDT9Q9BW91 350 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF416Q9BWM5 594 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 GPR61Q9BZJ8 451 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 PKIBQ9C010 78 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ROGDIQ9GZN7 287 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 LHPPQ9H008 270 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RHBGQ9H310 441 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ACTR8Q9H981 624 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ATPIF1Q9UII2 106 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MKLN1Q9UL63 735 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SLC22A7Q9Y694 548 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 IGHV1-45A0A0A0MS14 117 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 C13orf42A0A1B0GVH6 325 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ELOVL7A1L3X0 281 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 MFSD2BA6NFX1 497 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM90A7PA6NKC0 464 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 A8MUI8 341 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM90A22PA8MWA6 464 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM90A12PA8MX19 464 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 TRIM49D1C9J1S8 452 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CLDN4O14493 209 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 NDUFAB1O14561 156 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ADAM10O14672 748 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ERI3O43414 337 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 RGS10O43665 173 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 LCMT2O60294 686 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 GALR3O60755 368 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PAGE4O60829 102 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 B4GALT2O60909 372 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 MITFO75030 526 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CNOT3O75175 753 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 ATP6V1G1O75348 118 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SNRNP200O75643 2136 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 CEACAM4O75871 244 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 OR6B1O95007 311 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 BMP10O95393 424 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 TOMM40O96008 361 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 C1QAP02745 245 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 LIPFP07098 398 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SERPINA6P08185 405 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 IL6RP08887 468 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SNRPAP09012 282 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 RBP1P09455 135 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 PSG1P11464 419 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 COX6A1P12074 109 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 RNH1P13489 461 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 TAC1P20366 129 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 HNRNPH1P31943 449 aaKnown RBP4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SSR2P43308 183 aa4.29□□□□□ -1.72
ZNF540-204ENST00000586792 SLC6A12P48065 614 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms