RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HOPXQ9BPY8 73 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 TMED7Q9Y3B3 224 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 ADGRG4Q8IZF6 3080 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 FAM220BPB1ANY3 271 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 DCTN3O75935 186 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 OPN1SWP03999 348 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 NUDT2P50583 147 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 CRYBA2P53672 197 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 COPZ1P61923 177 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 ZNF239Q16600 458 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 PPP4R4Q6NUP7 873 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 ERICH5Q6P6B1 374 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 GPR32P1Q8NGA4 272 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 CPNE4Q96A23 557 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 TAMM41Q96BW9 452 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 LRRC37BQ96QE4 947 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 WFDC6Q9BQY6 131 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 PRRG4Q9BZD6 226 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 TIGARQ9NQ88 270 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 AP3M1Q9Y2T2 418 aa20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 SPIN1Q9Y657 262 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-204ENST00000535399 NBPF19A0A087WUL8 3843 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 TMEM72A0PK05 275 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 CCNA2P20248 432 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 FKBP2P26885 142 aaKnown RBP20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 KIR2DL2P43627 348 aaPredicted RBP20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 RAC3P60763 192 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 VEZF1Q14119 521 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 DUSP7Q16829 419 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 EEF1A1P5Q5VTE0 462 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 FAM91A1Q658Y4 838 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 ZNF787Q6DD87 383 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 TMPPEQ6ZT21 453 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 ROBO4Q8WZ75 1007 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 C3orf49Q96BT1 292 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 ARL5BQ96KC2 179 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 OR11A1Q9GZK7 315 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 JKAMPQ9P055 326 aa20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 GMPR2Q9P2T1 348 aaKnown RBP20.33■□□□□ 0.85
SFSWAP-204ENST00000535399 SYT5O00445 386 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 ZNF208O43345 1280 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 LGI1O95970 557 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 TFPIP10646 304 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 IGFBP2P18065 325 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 CD247P20963 164 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 HTR2AP28223 471 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 KCNJ5P48544 419 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 CLK1P49759 484 aaKnown RBP20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 ASCL1P50553 236 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 SLC7A2P52569 658 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 FBXL19-AS1Q494R0 122 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 GKAP1Q5VSY0 366 aaPredicted RBP20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 OR2T12Q8NG77 320 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 RNF128Q8TEB7 428 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 STARD4Q96DR4 205 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 ARHGDIGQ99819 225 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 ARL8BQ9NVJ2 186 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 SLC13A4Q9UKG4 626 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 HDGFL3Q9Y3E1 203 aa20.32■□□□□ 0.84
SFSWAP-204ENST00000535399 NME4O00746 187 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 KLK2P20151 261 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 ENPP1P22413 925 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 CPA2P48052 419 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 DIO1P49895 249 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 MAP2K6P52564 334 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 MYBPHQ13203 477 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 VWA1Q6PCB0 445 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 BTLAQ7Z6A9 289 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 ATG4DQ86TL0 474 aaPredicted RBP20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 MED12LQ86YW9 2145 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 MICU2Q8IYU8 434 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 LSMEM1Q8N8F7 131 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 CNEP1R1Q8N9A8 125 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 PRR14Q9BWN1 585 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 ENKD1Q9H0I2 346 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 PIGMQ9H3S5 423 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 EVA1AQ9H8M9 152 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 KLHL28Q9NXS3 571 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 CLEC4AQ9UMR7 237 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 UNC79Q9P2D8 2635 aa20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 INTS1Q8N201 2190 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-204ENST00000535399 ZC3H12DA2A288 527 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 EEF1E1-BLOC1S5C9J1V9 151 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 EEF1E1O43324 174 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 TPST2O60704 377 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 SS18L1O75177 396 aaPredicted RBP20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 PMS2P2O95744 297 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 C8BP07358 591 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 RGS8P57771 180 aaPredicted RBP20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 PSME3P61289 254 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 SIRPAP78324 504 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 LIPEQ05469 1076 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 NRF1Q16656 503 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 ABHD3Q8WU67 409 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 DDIT4LQ96D03 193 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 DNAJA3Q96EY1 480 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 GMPPAQ96IJ6 420 aaPredicted RBP20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 SPOCK3Q9BQ16 436 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 ABCD2Q9UBJ2 740 aa20.3■□□□□ 0.84
SFSWAP-204ENST00000535399 TESQ9UGI8 421 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms