RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 HIF1ANQ9NWT6 349 aa10.93□□□□□ -0.66
DDX41-215ENST00000512431 FAF1Q9UNN5 650 aaPredicted RBP10.93□□□□□ -0.66
DDX41-215ENST00000512431 SLC9A8Q9Y2E8 581 aa10.93□□□□□ -0.66
DDX41-215ENST00000512431 SPEF1Q9Y4P9 236 aa10.93□□□□□ -0.66
DDX41-215ENST00000512431 IGHV1-18A0A0C4DH31 117 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 hCG_2039718K7EN88 272 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 AKAP10O43572 662 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 DNPH1O43598 174 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 PMS2P2O95744 297 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 KRT16P08779 473 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 FKBP2P26885 142 aaKnown RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 NTF4P34130 210 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 APOBEC1P41238 236 aaKnown RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 KHKP50053 298 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 SESN3P58005 492 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 RIN1Q13671 783 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 TRIP10Q15642 601 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 ABHD12BQ7Z5M8 362 aaPredicted RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 CCDC103Q8IW40 242 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 SVOPLQ8N434 492 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 OR4F15Q8NGB8 312 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 ZNF524Q96C55 264 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 METTL2AQ96IZ6 378 aaKnown RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 SLC38A2Q96QD8 506 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 NAA11Q9BSU3 229 aaPredicted RBP10.92□□□□□ -0.66
DDX41-215ENST00000512431 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 DYNLRB1Q9NP97 96 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 HDGFL3Q9Y3E1 203 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 PCDHGB1Q9Y5G3 927 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 PLCE1Q9P212 2302 aa10.92□□□□□ -0.66
DDX41-215ENST00000512431 SH3PXD2BA1X283 911 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ESPNB1AK53 854 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 H3BQF6 201 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ANKRD28O15084 1053 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 TBX19O60806 448 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 KRT33AO76009 404 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 MSMBP08118 114 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 GSTA1P08263 222 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 EPHA1P21709 976 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 FRKP42685 505 aaPredicted RBP10.91□□□□□ -0.66
DDX41-215ENST00000512431 ARFIP2P53365 341 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 OR2B6P58173 313 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 UBE2NP61088 152 aaKnown RBP10.91□□□□□ -0.66
DDX41-215ENST00000512431 FOXL1Q12952 345 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ADRM1Q16186 407 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 MIDNQ504T8 468 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ZNF385BQ569K4 471 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 TSPO2Q5TGU0 170 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 FAHD2BQ6P2I3 314 aaPredicted RBP10.91□□□□□ -0.66
DDX41-215ENST00000512431 ZDHHC24Q6UX98 284 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 SPATA4Q8NEY3 305 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ZNF563Q8TA94 476 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
DDX41-215ENST00000512431 FAHD2AQ96GK7 314 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ANKRD27Q96NW4 1050 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 LRRC37BQ96QE4 947 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 SUCNR1Q9BXA5 334 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 ACTRT3Q9BYD9 372 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 LAT2Q9GZY6 243 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 MOV10Q9HCE1 1003 aaKnown RBP10.91□□□□□ -0.66
DDX41-215ENST00000512431 ACER3Q9NUN7 267 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 TMEM45AQ9NWC5 275 aa10.91□□□□□ -0.66
DDX41-215ENST00000512431 HEATR1Q9H583 2144 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 POC1B-GALNT4F8VUJ3 575 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 BCL10O95999 233 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 CSTAP01040 98 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 NPR2P20594 1047 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 CLK1P49759 484 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 PRKAA2P54646 552 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 FOXA1P55317 472 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 IL1RL1Q01638 556 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 NAAAQ02083 359 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 TP53BP2Q13625 1128 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 SPDYE7PQ495Y7 208 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 HIKESHIQ53FT3 197 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 EXOSC6Q5RKV6 272 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 PDZK1Q5T2W1 519 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 ANKRD16Q6P6B7 361 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 SPATA21Q7Z572 469 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 R3HCC1LQ7Z5L2 792 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 ZCCHC24Q8N2G6 241 aaKnown RBP10.9□□□□□ -0.66
DDX41-215ENST00000512431 LRRC17Q8N6Y2 441 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 CCNYL1Q8N7R7 359 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 POMGNT2Q8NAT1 580 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 OR51F2Q8NH61 342 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 DCAKDQ8WVC6 231 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 L3HYPDHQ96EM0 354 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 DNAJA3Q96EY1 480 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 ARL5BQ96KC2 179 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 TSSK3Q96PN8 268 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 PAFAH2Q99487 392 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 DOK1Q99704 481 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 CCT7Q99832 543 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 LPAR2Q9HBW0 351 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms