RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TUBB1Q9H4B7 451 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 IMPAD1Q9NX62 359 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 ERVW-1Q9UQF0 538 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 L3MBTL1Q9Y468 752 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 DOCK7Q96N67 2140 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 CLSPNQ9HAW4 1339 aa3.13□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A1B0GTH9 108 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF487B1APH4 448 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 IDSB3KWA1 339 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SUPT3HB4E1H0 165 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SULT2B1O00204 365 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SPOPO43791 374 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF432O94892 652 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SEMA4FO95754 770 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 TMEM50AO95807 157 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 GNA14O95837 355 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 LGALS2P05162 132 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SERPIND1P05546 499 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 CT45A10P0DMU9 189 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 UMPSP11172 480 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF24P17028 368 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 KITLGP21583 273 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 GSK3BP49841 420 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ACLYP53396 1101 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 LY6DQ14210 128 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ABRAXAS2Q15018 415 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 LTB4RQ15722 352 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF77Q15935 545 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 KLHL40Q2TBA0 621 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 VPS26BQ4G0F5 336 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SBK1Q52WX2 424 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 EIPR1Q53HC9 387 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF506Q5JVG8 444 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 C9orf66Q5T8R8 295 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 FAM199XQ6PEV8 388 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SCD5Q86SK9 330 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 MFSD6LQ8IWD5 586 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 KLHDC8BQ8IXV7 354 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 MICU2Q8IYU8 434 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 SDR9C7Q8NEX9 313 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ADAMTS16Q8TE57 1224 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 STMN2Q93045 179 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 CELF6Q96J87 481 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 C12orf42Q96LP6 360 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF597Q96LX8 424 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 PPA2Q9H2U2 334 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 ANKRA2Q9H9E1 313 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 WARS2Q9UGM6 360 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 PITPNC1Q9UKF7 332 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 NUP50Q9UKX7 468 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 NOTCH4Q99466 2003 aa3.12□□□□□ -1.91
TRAPPC13-208ENST00000505553 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 GOLGA8TH3BQL2 631 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 HCN1O60741 890 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MMP1P03956 469 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 P04436 131 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RHOXF2BP0C7M4 288 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 IL12AP29459 219 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RRM2P31350 389 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 HNRNPH3P31942 346 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 OPRD1P41143 372 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 XCR1P46094 333 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR1G1P47890 313 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 HLCSP50747 726 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PKNOX1P55347 436 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 EIF3EP60228 445 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 KCNJ2P63252 427 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MRPS11P82912 194 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 ALKBH6Q3KRA9 238 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PIP5KL1Q5T9C9 394 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC8B1Q6J4K2 584 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 NR2C2APQ86WQ0 139 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 NUDCD3Q8IVD9 361 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MCOLN2Q8IZK6 566 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 SVOPLQ8N434 492 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR4F6Q8NGB9 312 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 GPR151Q8TDV0 419 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 GIMAP1Q8WWP7 306 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 SGK3Q96BR1 496 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 SEC22AQ96IW7 307 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PLEKHA8Q96JA3 519 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MS4A14Q96JA4 679 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 CYP2S1Q96SQ9 504 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PSMB7Q99436 277 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RNF2Q99496 336 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RHOXF2Q9BQY4 288 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 RIOK1Q9BRS2 568 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 TM2D1Q9BX74 207 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 CAB39LQ9H9S4 337 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 CHRAC1Q9NRG0 131 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PAK1IP1Q9NWT1 392 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 CTSZQ9UBR2 303 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PEF1Q9UBV8 284 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms