RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TFPTP0C1Z6 253 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 IMPDH2P12268 514 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 PRG2P13727 222 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 HOXB9P17482 250 aaPredicted RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 TACR3P29371 465 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 APOBEC1P41238 236 aaKnown RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 AQP5P55064 265 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 FOXG1P55316 489 aaPredicted RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 DSTNP60981 165 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 HOXC5Q00444 222 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 EPS8Q12929 822 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 BNIP2Q12982 314 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 PAGE3Q5JUK9 113 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 GRINAQ7Z429 371 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 STK32CQ86UX6 486 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 MSRB3Q8IXL7 192 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 MIER2Q8N344 545 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 SLC38A5Q8WUX1 472 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 NEUROG1Q92886 237 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 TMEM19Q96HH6 336 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 ITCHQ96J02 903 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 SMR3AQ99954 134 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 MTHFD2LQ9H903 347 aaPredicted RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 BCO1Q9HAY6 547 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 TCF7L2Q9NQB0 619 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 EXOSC3Q9NQT5 275 aaKnown RBP9.41□□□□□ -0.9
NELFE-213ENST00000494956 SLC25A37Q9NYZ2 338 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 P2RX2Q9UBL9 471 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 LIPT1Q9Y234 373 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 TMED7Q9Y3B3 224 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 DSPPQ9NZW4 1301 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ZNF716A6NP11 495 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 POLR3GO15318 223 aaPredicted RBP9.4□□□□□ -0.9
NELFE-213ENST00000494956 FRS3O43559 492 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 SASH3O75995 380 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ZCCHC18P0CG32 403 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 PSMB1P20618 241 aaKnown RBP9.4□□□□□ -0.9
NELFE-213ENST00000494956 IGHV1-2P23083 117 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 HOXC12P31275 282 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ACAA2P42765 397 aaKnown RBP9.4□□□□□ -0.9
NELFE-213ENST00000494956 OR3A2P47893 321 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ANXA11P50995 505 aaKnown RBP9.4□□□□□ -0.9
NELFE-213ENST00000494956 OR2B6P58173 313 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 PPP2R2AP63151 447 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 LRRC74AQ0VAA2 488 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 RGNQ15493 299 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 TAB1Q15750 504 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ACKR1Q16570 336 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 SFRP5Q5T4F7 317 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 COMTD1Q86VU5 262 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 SLC43A2Q8N370 569 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 CADM2Q8N3J6 435 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 DYDC1Q8WWB3 177 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 RMND5AQ9H871 391 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 SLC52A3Q9NQ40 469 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 DLL4Q9NR61 685 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 CCDC167Q9P0B6 97 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 KLHL9Q9P2J3 617 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 ZNF443Q9Y2A4 671 aaPredicted RBP9.4□□□□□ -0.9
NELFE-213ENST00000494956 GPR52Q9Y2T5 361 aa9.4□□□□□ -0.9
NELFE-213ENST00000494956 MAP1AP78559 2803 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 ACANP16112 2415 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 A0A1W2PR80 420 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 CFAP73A6NFT4 308 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 CLIC1O00299 241 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 PMS2P2O95744 297 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 DBIP07108 87 aaKnown RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 FPR1P21462 350 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 IL32P24001 234 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 ADSLP30566 484 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 POLR2HP52434 150 aaKnown RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 CRISP3P54108 245 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 CSNK2A1P68400 391 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 NKX6-1P78426 367 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 SF3A3Q12874 501 aaKnown RBP eCLIP9.39□□□□□ -0.91
NELFE-213ENST00000494956 CAPRIN1Q14444 709 aaKnown RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 STK11Q15831 433 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 BEX5Q5H9J7 111 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 ZNF704Q6ZNC4 412 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 MSANTD1Q6ZTZ1 278 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 BHLHA15Q7RTS1 189 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 SERPINA11Q86U17 422 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 MTDHQ86UE4 582 aaKnown RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 CMIPQ8IY22 773 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 LILRB1Q8NHL6 650 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 SLC25A43Q8WUT9 341 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 KISS1RQ969F8 398 aaPredicted RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 PERPQ96FX8 193 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 CCL19Q99731 98 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 IKZF5Q9H5V7 419 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 INTS9Q9NV88 658 aaKnown RBP9.39□□□□□ -0.91
NELFE-213ENST00000494956 VAPAQ9P0L0 249 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms