RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZDHHC11Q9H8X9 412 aa3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 GORASP2Q9H8Y8 452 aa3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 COPS3Q9UNS2 423 aa3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 IFT52Q9Y366 437 aa3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 PRRC2AP48634 2157 aaKnown RBP3.26□□□□□ -1.89
SMNDC1-205ENST00000477763 PCP4L1A6NKN8 68 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 F5H6K3 240 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PFKFB2O60825 505 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 MMP23AO75900 390 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 IGHV3-48P01763 117 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 LGALS2P05162 132 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 DUX4L4P0CJ87 422 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 COX5AP20674 150 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 GCAP28676 217 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 LEPP41159 167 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 HNMTP50135 292 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 GBX2P52951 348 aaPredicted RBP3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 TIMM10P62072 90 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 KLRC3Q07444 240 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 RIPK1Q13546 671 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PDK3Q15120 406 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 EXOC3L2Q2M3D2 409 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 UNQ9370/PRO34162Q6UXP9 181 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 VSTM4Q8IW00 320 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 CCDC65Q8IXS2 484 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 OR56B4Q8NH76 319 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 DNAJA4Q8WW22 397 aaPredicted RBP3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 OR1E3Q8WZA6 343 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PIGCQ92535 297 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 SEC22AQ96IW7 307 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PGLYRP4Q96LB8 373 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 TECTBQ96PL2 329 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 CCNL2Q96S94 520 aaPredicted RBP3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 CCT7Q99832 543 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 EBF4Q9BQW3 602 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 CRACR2AQ9BSW2 395 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 RAB34Q9BZG1 259 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 VCX2Q9H322 139 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 LRRN3Q9H3W5 708 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PDFQ9HBH1 243 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 POPDC2Q9HBU9 364 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 SH2D2AQ9NP31 389 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PLSCR3Q9NRY6 295 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 UFSP2Q9NUQ7 469 aa3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 PRPF19Q9UMS4 504 aaKnown RBP3.25□□□□□ -1.89
SMNDC1-205ENST00000477763 TTC21BQ7Z4L5 1316 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 VSTM2BA6NLU5 285 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 TRDCB7Z8K6 153 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 HIP1O00291 1037 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 POLR2DO15514 142 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 SNNO75324 88 aaPredicted RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 HMMRO75330 724 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 ACTL6AO96019 429 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 IGHG4P01861 327 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 ZNF19P17023 458 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 CALCRP30988 508 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 UGT1A5P35504 534 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 GRIA1P42261 906 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 FGL1Q08830 312 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 GPM6BQ13491 265 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 OTPQ5XKR4 325 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 RGS9BPQ6ZS82 235 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 FAM220AQ7Z4H9 259 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 ERI1Q8IV48 349 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 TBC1D21Q8IYX1 336 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 FBXO30Q8TB52 745 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 ZIM3Q96PE6 472 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 RBM14Q96PK6 669 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 POLR2J2Q9GZM3 115 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 NT5C3AQ9H0P0 336 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 MAGT1Q9H0U3 335 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 POLR2J3Q9H1A7 115 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 NARFLQ9H6Q4 476 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 APMAPQ9HDC9 416 aa3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 PTBP2Q9UKA9 531 aaKnown RBP3.24□□□□□ -1.89
SMNDC1-205ENST00000477763 A0A1B0GUS0 222 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 AP2A1O95782 977 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 TIMP1P01033 207 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 RFC4P35249 363 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 SSR1P43307 286 aaKnown RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 ARFIP1P53367 373 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 PKNOX1P55347 436 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 BIDP55957 195 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 C1orf61Q13536 156 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 PMF1Q6P1K2 205 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 Q6ZPB1 254 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 TGIF2LYQ8IUE0 185 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 CCDC71LQ8N9Z2 235 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 FRAT1Q92837 279 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 COQ2Q96H96 371 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 IMMP1LQ96LU5 166 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 RPRD1AQ96P16 312 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 HIST1H4GQ99525 98 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 KLHDC3Q9BQ90 382 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 SELENOIQ9C0D9 397 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms