RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 H0YC42 278 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 KLF4O43474 513 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 ATG12O94817 140 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 PCDH8O95206 1070 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 ECDO95905 644 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 CKMP06732 381 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 ASGR2P07307 311 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 PSMB5P28074 263 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 RECQLP46063 649 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 NRG3P56975 720 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 ELFN2Q5R3F8 820 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 FAM199XQ6PEV8 388 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 C11orf88Q6PI97 169 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 CBLN2Q8IUK8 224 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 CCDC116Q8IYX3 515 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 KCT2Q8NC54 265 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 UBE2E3Q969T4 207 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 SCLYQ96I15 445 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 BBS4Q96RK4 519 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 GABARAPH6UMI1 98 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 FCMRO60667 390 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 CDC123O75794 336 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 TYRP14679 529 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 TEAD1P28347 426 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 DLX5P56178 289 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 AP3S2P59780 193 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 DUSP2Q05923 314 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 HFEQ30201 348 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 C9orf50Q5SZB4 431 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 BAIAP2L2Q6UXY1 529 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 FAM129CQ86XR2 697 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
NPHP4-207ENST00000470763 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 MS4A8Q9BY19 250 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
NPHP4-207ENST00000470763 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ABHD14A-ACY1A0A1B0GW23 586 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 F5H5P2 479 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 SMAD9O15198 467 aaKnown RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 POP4O95707 220 aaKnown RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 SBK2P0C263 348 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 NT5EP21589 574 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 GDI2P50395 445 aaKnown RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 CSRP2Q16527 193 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 DECR1Q16698 335 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ZNF805Q5CZA5 627 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 MBOAT2Q6ZWT7 520 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 TRAM1L1Q8N609 369 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ARHGDIGQ99819 225 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 TMEM138Q9NPI0 162 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 C20orf141Q9NUB4 165 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 POT1Q9NUX5 634 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 TCF20Q9UGU0 1960 aaKnown RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 TRAV1-2A0A0B4J238 106 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 UBE2QL1A1L167 161 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 NAP1L6A6NFF2 107 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 MEOX2P50222 304 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 RAB13P51153 203 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 LTB4RQ15722 352 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 HAGHLQ6PII5 290 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 NUDT13Q86X67 352 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 OR52L1Q8NGH7 329 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 PFN4Q8NHR9 129 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 MACROD1Q9BQ69 325 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 FKRPQ9H9S5 495 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ACSS1Q9NUB1 689 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-207ENST00000470763 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 MOKQ9UQ07 419 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.37
NPHP4-207ENST00000470763 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.71□□□□□ -0.38
NPHP4-207ENST00000470763 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 LINC00587B1AMM8 73 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 DISC1C4P0D8 188 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 H7BY64 318 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.38
NPHP4-207ENST00000470763 TAS2R43P59537 309 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 POLR2GP62487 172 aaKnown RBP eCLIP12.71□□□□□ -0.38
NPHP4-207ENST00000470763 SHHQ15465 462 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 FAM209BQ5JX69 171 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 TMEM69Q5SWH9 247 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 SLC6A19Q695T7 634 aa12.71□□□□□ -0.38
NPHP4-207ENST00000470763 Q6ZNB5 142 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms