RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 CMIPQ8IY22 773 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 GLB1L3Q8NCI6 653 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 PIWIL2Q8TC59 973 aaKnown RBP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 PNPT1Q8TCS8 783 aaKnown RBP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 OR52B2Q96RD2 323 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 PANX1Q96RD7 426 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 POTEKPQ9BYX7 375 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 TMBIM4Q9HC24 238 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 SDR39U1Q9NRG7 319 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 SERINC1Q9NRX5 453 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-211ENST00000467464 NPAP1Q9NZP6 1156 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 OSGIN1Q9UJX0 560 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 LIPT1Q9Y234 373 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 HDGFL3Q9Y3E1 203 aa10.58□□□□□ -0.72
PTPRF-211ENST00000467464 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 TRPC5OSA6NMA1 111 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 OVOL3O00110 214 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 SULT2B1O00204 365 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 KLF11O14901 512 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 DNPH1O43598 174 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 TMCC2O75069 709 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 LYZL6O75951 148 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 PGM3O95394 542 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 LY6G6DO95868 133 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 HEXAP06865 529 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 SOD3P08294 240 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 IMPDH2P12268 514 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 HOXB9P17482 250 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-211ENST00000467464 IL32P24001 234 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 IDH2P48735 452 aaKnown RBP10.57□□□□□ -0.72
PTPRF-211ENST00000467464 SLC16A1P53985 500 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 CSNK2A1P68400 391 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-211ENST00000467464 LRRC74AQ0VAA2 488 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 EPS8Q12929 822 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 MRPL2Q5T653 305 aaKnown RBP10.57□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF621Q6ZSS3 439 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 Q71RC1 249 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF563Q8TA94 476 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 ARL8AQ96BM9 186 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 DNAJA3Q96EY1 480 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 CHST2Q9Y4C5 530 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 RNF115Q9Y4L5 304 aa10.57□□□□□ -0.72
PTPRF-211ENST00000467464 TMED7-TICAM2A0A0A6YYA0 188 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ZC3H12DA2A288 527 aaKnown RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 SLCO1B7G3V0H7 640 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 PDLIM1O00151 329 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 CNOT4O95628 575 aaKnown RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ZCCHC18P0CG32 403 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ETFAP13804 333 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 IDO1P14902 403 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ADSLP30566 484 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ACAA2P42765 397 aaKnown RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 MAGEA8P43361 318 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 CLK1P49759 484 aaKnown RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 FOXG1P55316 489 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 HPCAP84074 193 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 BSPH1Q075Z2 132 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 PGGHGQ32M88 737 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF672Q499Z4 452 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ATG16L1Q676U5 607 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ALKBH2Q6NS38 261 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 CLEC9AQ6UXN8 241 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 MSANTD1Q6ZTZ1 278 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 GALNT5Q7Z7M9 940 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 CCDC103Q8IW40 242 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TRIML2Q8N7C3 387 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF433Q8N7K0 673 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 KBTBD8Q8NFY9 601 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 OR9I1Q8NGQ6 314 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TMEM171Q8WVE6 324 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 WDR60Q8WVS4 1066 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 PMM1Q92871 262 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 AURKBQ96GD4 344 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 USB1Q9BQ65 265 aaKnown RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TRIM2Q9C040 744 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 MANSC1Q9H8J5 431 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 MTHFD2LQ9H903 347 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 RLIMQ9NVW2 624 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 ZIM2Q9NZV7 527 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TRAPPC4Q9Y296 219 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 TMED7Q9Y3B3 224 aa10.56□□□□□ -0.72
PTPRF-211ENST00000467464 SPIN1Q9Y657 262 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-211ENST00000467464 CDHR4A6H8M9 788 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 SHISA9B4DS77 424 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 RFXANKO14593 260 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 ZNF208O43345 1280 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 SLC22A3O75751 556 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 CD8AP01732 235 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 IGHV3-9P01782 118 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 IL6P05231 212 aa10.55□□□□□ -0.72
PTPRF-211ENST00000467464 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms