RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 MBNL1Q9NR56 388 aaKnown RBP12□□□□□ -0.49
PDZRN3-205ENST00000466780 HAO2Q9NYQ3 351 aa12□□□□□ -0.49
PDZRN3-205ENST00000466780 ACSL5Q9ULC5 683 aa12□□□□□ -0.49
PDZRN3-205ENST00000466780 KCNK6Q9Y257 313 aa12□□□□□ -0.49
PDZRN3-205ENST00000466780 PLEKHM1Q9Y4G2 1056 aa12□□□□□ -0.49
PDZRN3-205ENST00000466780 PEX12O00623 359 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 PTP4A3O75365 173 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ALDOBP05062 364 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 THBS1P07996 1170 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 PSMB1P20618 241 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 EIPR1Q53HC9 387 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 NHLRC3Q5JS37 347 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 FAM199XQ6PEV8 388 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 LINGO2Q7L985 606 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 KCTD20Q7Z5Y7 419 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 OR4N5Q8IXE1 308 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF671Q8TAW3 534 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 SMIM19Q96E16 107 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 WDR89Q96FK6 387 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 KLHL15Q96M94 604 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 GFI1Q99684 422 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 SARGQ9BW04 601 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 CA10Q9NS85 328 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 HCN3Q9P1Z3 774 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 MUC22E2RYF6 1773 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 PLSCR5A0PG75 271 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 RGS11O94810 467 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 RPS4Y1P22090 263 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 RAD52P43351 418 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ACTC1P68032 377 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ACTA1P68133 377 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 PLAURQ03405 335 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF234Q14588 700 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 FAM69AQ5T7M9 428 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 RPL13AP3Q6NVV1 102 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 GRASPQ7Z6J2 395 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ETFBKMTQ8IXQ9 262 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 OR2L13Q8N349 312 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 LRRC25Q8N386 305 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 OR52I2Q8NH67 350 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 RSPRY1Q96DX4 576 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 LINC00052Q96N35 136 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 SFXN2Q96NB2 322 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF350Q9GZX5 532 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 PLEKHA1Q9HB21 404 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 CACYBPQ9HB71 228 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 DENND4AQ7Z401 1863 aa11.99□□□□□ -0.49
PDZRN3-205ENST00000466780 TBC1D3EA0A087X179 549 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 hCG_1807616A0A1W2PRN6 198 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ARPC1BO15143 372 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 BET1O15155 118 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 STX11O75558 287 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ARL6IP5O75915 188 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 SERPINA3P01011 423 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ATP1B1P05026 303 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 CTRB1P17538 263 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TYRP1P17643 537 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ATF4P18848 351 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 DHODHQ02127 395 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 CTRB2Q6GPI1 263 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 OVCH1Q7RTY7 1134 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 MFSD9Q8NBP5 474 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 FAM71CQ8NEG0 241 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 OR4C6Q8NH72 309 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 LHFPL5Q8TAF8 219 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 SLC2A12Q8TD20 617 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 SLC25A38Q96DW6 304 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ZMYND19Q96E35 227 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 USP36Q9P275 1121 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 KIF25Q9UIL4 384 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 C5orf42Q9H799 3197 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TUBAL3A6NHL2 446 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 OTOL1A6NHN0 477 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 MID1O15344 667 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 PIN1P1O15428 100 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 PRAF2O60831 178 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 DNAJB6O75190 326 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 AGR2O95994 175 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TIMP1P01033 207 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF3P17036 446 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 CEBPBP17676 345 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 POU3F2P20265 443 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TSFMP43897 325 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 GBX2P52951 348 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 BAMBIQ13145 260 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 FHL1Q13642 323 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 AMZ1Q400G9 498 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TRMT12Q53H54 448 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF619Q8N2I2 560 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 HMGB4Q8WW32 186 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 ELMOD3Q96FG2 381 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 TNFRSF13CQ96RJ3 184 aa11.98□□□□□ -0.49
PDZRN3-205ENST00000466780 PDCD1LG2Q9BQ51 273 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms