RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NXF5Q9H1B4 397 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CENPHQ9H3R5 247 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 TSPY26PQ9H489 355 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 GOLPH3LQ9H4A5 285 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 TMEM165Q9HC07 324 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ZBTB26Q9HCK0 441 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 GALPQ9UBC7 116 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 DKKL1Q9UK85 242 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 MCTS1Q9ULC4 181 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ERVK-19Q9WJR5 959 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 MRPS33Q9Y291 106 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 INSIG2Q9Y5U4 225 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 A0A0G2JN53 185 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 A0A0J9YW62 118 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 URADA6NGE7 173 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 C3orf70A6NLC5 250 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TRIM49D1C9J1S8 452 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 CD3EAPO15446 510 aaKnown RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 CXCL13O43927 109 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 HNRNPH1P31943 449 aaKnown RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TNNT3P45378 269 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 EFNB2P52799 333 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TBPL1P62380 186 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 PAX2Q02962 417 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 PDK2Q15119 407 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TMED2Q15363 201 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TBCCQ15814 346 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 ZIK1Q3SY52 487 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 ACSBG2Q5FVE4 666 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 RAET1LQ5VY80 246 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC35E4Q6ICL7 350 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHL10Q6JEL2 608 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 FRRS1Q6ZNA5 592 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF551Q7Z340 670 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TRABD2AQ86V40 505 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 C17orf64Q86WR6 236 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 ADGRG3Q86Y34 549 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHDC8BQ8IXV7 354 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 IZUMO1Q8IYV9 350 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TXLNBQ8N3L3 684 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 KCTD6Q8NC69 237 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR2M3Q8NG83 312 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR4F17Q8NGA8 305 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR52E2Q8NGJ4 325 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR10S1Q8NGN2 331 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR13J1Q8NGT2 312 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 GSDMBQ8TAX9 411 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 SSMEM1Q8WWF3 244 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 RAPGEF5Q92565 580 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 UPRTQ96BW1 309 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 RAB39BQ96DA2 213 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 RBM18Q96H35 190 aaKnown RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 FAM71F1Q96KD3 344 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR4F4Q96R69 305 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 OR4K3Q96R72 315 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 ATOH8Q96SQ7 321 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TSSK1BQ9BXA7 367 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TPK1Q9H3S4 243 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 FAM114A2Q9NRY5 505 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 TBC1D23Q9NUY8 699 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 PAQR5Q9NXK6 330 aaPredicted RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 KLRF1Q9NZS2 232 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 MRPL15Q9P015 296 aaKnown RBP4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 LRCH1Q9Y2L9 728 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 SIGLEC9Q9Y336 463 aa4.35□□□□□ -1.71
SBDSP1-204ENST00000453858 BICDL2A1A5D9 508 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 SH3PXD2BA1X283 911 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PDLIM1O00151 329 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PSMD9O00233 223 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PRMT5O14744 637 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 COQ9O75208 318 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 NIPSNAP2O75323 286 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 RAD51DO75771 328 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 COX7A2P14406 83 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PECAM1P16284 738 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ZFXP17010 805 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 S1PR1P21453 382 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 MYF6P23409 242 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PSMA4P25789 261 aaKnown RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 THBS4P35443 961 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC1A3P43003 542 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 BIKQ13323 160 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 RNPS1Q15287 305 aaKnown RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 RBMY1FQ15415 496 aaKnown RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHL38Q2WGJ6 581 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 NSUN5P1Q3KNT7 163 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 GRAMD1BQ3KR37 738 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ADPRMQ3LIE5 342 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 AVPI1Q5T686 147 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 C6orf163Q5TEZ5 329 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 CLEC6AQ6EIG7 209 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 CASC4Q6P4E1 433 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ANKRD16Q6P6B7 361 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms