RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 HTR3AP46098 478 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
ACTB-206ENST00000443528 RAC3P60763 192 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 HOXC5Q00444 222 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 DMTNQ08495 405 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 SNTB1Q13884 538 aaKnown RBP14.05□□□□□ -0.16
ACTB-206ENST00000443528 FAM214BQ7L5A3 538 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 PIGWQ7Z7B1 504 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 LUZP2Q86TE4 346 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 RNF128Q8TEB7 428 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 SLC35B4Q969S0 331 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 GMPPAQ96IJ6 420 aaPredicted RBP14.05□□□□□ -0.16
ACTB-206ENST00000443528 ARL5BQ96KC2 179 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 ZNF607Q96SK3 696 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 SH3GL1Q99961 368 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 OR11A1Q9GZK7 315 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 PIGMQ9H3S5 423 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 TIGARQ9NQ88 270 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 FAM53CQ9NYF3 392 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 PACSIN3Q9UKS6 424 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 USP22Q9UPT9 525 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 TMED7Q9Y3B3 224 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 FBN2P35556 2912 aa14.05□□□□□ -0.16
ACTB-206ENST00000443528 IGHV3-15A0A0B4J1V0 119 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 PRORSD1PA6NEY8 169 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 A8MXE2 369 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 M0QX08 132 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 SS18L1O75177 396 aaPredicted RBP14.04□□□□□ -0.16
ACTB-206ENST00000443528 TFPIP10646 304 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 ENPP1P22413 925 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 UQCRC1P31930 480 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 PCGF2P35227 344 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 DIO1P49895 249 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 VMACQ2NL98 169 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 WBP2NLQ6ICG8 309 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 TMPPEQ6ZT21 453 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 ARMC8Q8IUR7 673 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 CADM2Q8N3J6 435 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 ABHD3Q8WU67 409 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 DNAJA3Q96EY1 480 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 ZNF583Q96ND8 569 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 WFDC6Q9BQY6 131 aa14.04□□□□□ -0.16
ACTB-206ENST00000443528 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
ACTB-206ENST00000443528 RBM24Q9BX46 236 aaKnown RBP14.04□□□□□ -0.16
ACTB-206ENST00000443528 SPIN1Q9Y657 262 aaPredicted RBP14.04□□□□□ -0.16
ACTB-206ENST00000443528 INTS1Q8N201 2190 aaKnown RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 MSTNO14793 375 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 AIM2O14862 343 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 ZNF208O43345 1280 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 SERPINB7O75635 380 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.163e-14■■■■□ 21.3
ACTB-206ENST00000443528 OPN1SWP03999 348 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 FKBP2P26885 142 aaKnown RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 COPZ1P61923 177 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 MYBPHQ13203 477 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 ZNF474Q6S9Z5 364 aaPredicted RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 FCRLAQ7L513 359 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 SLC30A8Q8IWU4 369 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 MCEMP1Q8IX19 187 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 SMYD1Q8NB12 490 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 GPR32P1Q8NGA4 272 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 C3orf49Q96BT1 292 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 OPN3Q9H1Y3 402 aaPredicted RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 GLRX2Q9NS18 164 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 FOXD3Q9UJU5 478 aaPredicted RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 ING1Q9UK53 422 aaPredicted RBP14.03□□□□□ -0.16
ACTB-206ENST00000443528 HDGFL3Q9Y3E1 203 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 ITPR2Q14571 2701 aa14.03□□□□□ -0.16
ACTB-206ENST00000443528 ZC3H12DA2A288 527 aaKnown RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 SULT2B1O00204 365 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 PMS2P2O95744 297 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 PLGP00747 810 aaPredicted RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 CD8BP10966 210 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 HTR2AP28223 471 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 MAP2K6P52564 334 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 CRYBA2P53672 197 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 BNIP2Q12982 314 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 RNPS1Q15287 305 aaKnown RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 DUSP7Q16829 419 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 GTF2IRD2BQ6EKJ0 949 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 CCDC80Q76M96 950 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 ATG4DQ86TL0 474 aaPredicted RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 GTF2IRD2Q86UP8 949 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 ZNF610Q8N9Z0 462 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 BHLHE22Q8NFJ8 381 aaPredicted RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 OR6K3Q8NGY3 331 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 DDIT4LQ96D03 193 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 LRRC46Q96FV0 321 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 REXO5Q96IC2 774 aaKnown RBP14.02□□□□□ -0.17
ACTB-206ENST00000443528 PRR14Q9BWN1 585 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 PLSCR4Q9NRQ2 329 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 CMTM6Q9NX76 183 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 EMC9Q9Y3B6 208 aa14.02□□□□□ -0.17
ACTB-206ENST00000443528 CCT8L1PA6NM43 557 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms