RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CLK1P49759 484 aaKnown RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 POLR2HP52434 150 aaKnown RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CSNK2A1P68400 391 aaPredicted RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 TMEM201Q5SNT2 666 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 GCNT6Q5T4J0 391 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CGB2Q6NT52 195 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 RETREG3Q86VR2 466 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 TUSC5Q8IXB3 177 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CLIP4Q8N3C7 705 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 ARL5BQ96KC2 179 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CPPED1Q9BRF8 314 aaPredicted RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 SPATA9Q9BWV2 254 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CCDC134Q9H6E4 229 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 OSGIN1Q9UJX0 560 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 ING1Q9UK53 422 aaPredicted RBP18.1■□□□□ 0.49
GTF3A-202ENST00000419181 PRDM4Q9UKN5 801 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 ZNF232Q9UNY5 417 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 CORO2BQ9UQ03 480 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 IFT52Q9Y366 437 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 NDUFAF1Q9Y375 327 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 FREM1Q5H8C1 2179 aa18.1■□□□□ 0.49
GTF3A-202ENST00000419181 TMED7-TICAM2A0A0A6YYA0 188 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 C5orf58C9J3I9 102 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 ANGPT2O15123 496 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 CYTIPO60759 359 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 GKN3PP0CG01 181 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 ETS2P15036 469 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 KLK2P20151 261 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 TACR3P29371 465 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 GUCY1A3Q02108 690 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 EXOC3L2Q2M3D2 409 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 DHDDSQ86SQ9 333 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 NFKBIDQ8NI38 313 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 NRGNQ92686 78 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 WFIKKN1Q96NZ8 548 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 PSD2Q9BQI7 771 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 TACO1Q9BSH4 297 aaKnown RBP18.09■□□□□ 0.49
GTF3A-202ENST00000419181 OR11A1Q9GZK7 315 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 ADAM19Q9H013 955 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 ARMC7Q9H6L4 198 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 C12orf49Q9H741 205 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 BCO1Q9HAY6 547 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 CACYBPQ9HB71 228 aaKnown RBP18.09■□□□□ 0.49
GTF3A-202ENST00000419181 KLHL9Q9P2J3 617 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 TMED7Q9Y3B3 224 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 HDGFL3Q9Y3E1 203 aa18.09■□□□□ 0.49
GTF3A-202ENST00000419181 EVPLLA8MZ36 301 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF208O43345 1280 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 PMS2P2O95744 297 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 FESP07332 822 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 YES1P07947 543 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 MAP2K6P52564 334 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 RUNDC3AQ59EK9 446 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF311Q5JNZ3 666 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 REEP3Q6NUK4 255 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 TFAP2EQ6VUC0 442 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 BEND4Q6ZU67 534 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF550Q7Z398 422 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 NUFIP2Q7Z417 695 aaKnown RBP18.08■□□□□ 0.48
GTF3A-202ENST00000419181 STK32CQ86UX6 486 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 CDC20BQ86Y33 519 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 TMEM38AQ9H6F2 299 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 KLHL28Q9NXS3 571 aa18.08■□□□□ 0.48
GTF3A-202ENST00000419181 TMEM72A0PK05 275 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 DNPH1O43598 174 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 HRGP04196 525 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 VIMP08670 466 aaKnown RBP18.07■□□□□ 0.48
GTF3A-202ENST00000419181 PRG2P13727 222 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 CCNA2P20248 432 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 CDK6Q00534 326 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 RASGEF1BQ0VAM2 473 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 ADRM1Q16186 407 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 ABLIM2Q6H8Q1 611 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 STAC2Q6ZMT1 411 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 MTDHQ86UE4 582 aaKnown RBP18.07■□□□□ 0.48
GTF3A-202ENST00000419181 LSRQ86X29 649 aaPredicted RBP18.07■□□□□ 0.48
GTF3A-202ENST00000419181 SLC35B4Q969S0 331 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 DDIT4LQ96D03 193 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 ANKRD27Q96NW4 1050 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 CGREF1Q99674 301 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 MED18Q9BUE0 208 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 RSPO3Q9BXY4 272 aaPredicted RBP18.07■□□□□ 0.48
GTF3A-202ENST00000419181 KLHL4Q9C0H6 718 aa18.07■□□□□ 0.48
GTF3A-202ENST00000419181 AKAP9Q99996 3911 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 CASKO14936 926 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 PRKAR1BP31321 381 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 DNAJA1P31689 397 aaKnown RBP18.06■□□□□ 0.48
GTF3A-202ENST00000419181 ARFIP2P53365 341 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 COPZ1P61923 177 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 WBP2NLQ6ICG8 309 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 SERPINA11Q86U17 422 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 DNAJA3Q96EY1 480 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF300Q96RE9 604 aaPredicted RBP18.06■□□□□ 0.48
GTF3A-202ENST00000419181 FANCFQ9NPI8 374 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 MRGBPQ9NV56 204 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 TMEM181Q9P2C4 612 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 TRAPPC4Q9Y296 219 aa18.06■□□□□ 0.48
GTF3A-202ENST00000419181 ZC3H12DA2A288 527 aaKnown RBP18.05■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF724A8MTY0 619 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms