RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FBXW9Q5XUX1 488 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 MISPQ8IVT2 679 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 COX18Q8N8Q8 333 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 FNDC5Q8NAU1 212 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 OR7A2PQ8NGA2 310 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 FBXO30Q8TB52 745 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 ZFP90Q8TF47 636 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 ZNF75CPQ92670 426 aaPredicted RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 HPS1Q92902 700 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 FAM120BQ96EK7 910 aaKnown RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 C16orf58Q96GQ5 468 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 STACQ99469 402 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 TMEM109Q9BVC6 243 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 BTBD2Q9BX70 525 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 ZNF696Q9H7X3 374 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 COQ10BQ9H8M1 238 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 DUSP22Q9NRW4 184 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 ZCCHC3Q9NUD5 404 aaKnown RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 GIN1Q9NXP7 522 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 ZDHHC2Q9UIJ5 367 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 PRKDCP78527 4128 aaKnown RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 A0A1W2PQD3 144 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 SCDO00767 359 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 TYROBPO43914 113 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 LILRA1O75019 489 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 HMGN2P05204 90 aaKnown RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 LAMP1P11279 417 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 EFNA1P20827 205 aaPredicted RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 PRPS1L1P21108 318 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 PCMT1P22061 227 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 ELK4P28324 431 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 CDH15P55291 814 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 RAC3P60763 192 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 MAD2L1Q13257 205 aaPredicted RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 PDCD2Q16342 344 aaPredicted RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 ZSWIM7Q19AV6 140 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 AWAT1Q58HT5 328 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 EXOSC6Q5RKV6 272 aaKnown RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 THSD4Q6ZMP0 1018 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 TOR1AIP2Q8NFQ8 470 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 OR5P2Q8WZ92 322 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 JADE3Q92613 823 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 COQ8BQ96D53 544 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 CHMP6Q96FZ7 201 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 C3orf30Q96M34 536 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 PIGUQ9H490 435 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 SIRT3Q9NTG7 399 aaPredicted RBP13.85□□□□□ -0.19
DDX55-202ENST00000354291 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 MOKQ9UQ07 419 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 VWFP04275 2813 aa13.85□□□□□ -0.19
DDX55-202ENST00000354291 ZNF724A8MTY0 619 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 CYTIPO60759 359 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 KRT16P08779 473 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 ETV4P43268 484 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 CCT3P49368 545 aaKnown RBP13.84□□□□□ -0.19
DDX55-202ENST00000354291 DVL1P1P54792 670 aaPredicted RBP13.84□□□□□ -0.19
DDX55-202ENST00000354291 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 CCNIQ14094 377 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 LASP1Q14847 261 aaKnown RBP13.84□□□□□ -0.19
DDX55-202ENST00000354291 PTGR1Q14914 329 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 SPATA19Q7Z5L4 167 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 ZAR1Q86SH2 424 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 OR56A1Q8NGH5 318 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 TUBGCP3Q96CW5 907 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 C1orf50Q9BV19 199 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 ACTRT3Q9BYD9 372 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 HOXD1Q9GZZ0 328 aa13.84□□□□□ -0.19
DDX55-202ENST00000354291 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
DDX55-202ENST00000354291 SKAP2O75563 359 aaPredicted RBP13.83□□□□□ -0.2
DDX55-202ENST00000354291 TACSTD2P09758 323 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ATP6V1C1P21283 382 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ARRB2P32121 409 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 SERPINF1P36955 418 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 RNF144AP50876 292 aaPredicted RBP13.83□□□□□ -0.2
DDX55-202ENST00000354291 FOXG1P55316 489 aaPredicted RBP13.83□□□□□ -0.2
DDX55-202ENST00000354291 CD226Q15762 336 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 GABRA6Q16445 453 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 CCNJQ5T5M9 372 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 C9orf135Q5VTT2 229 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 OR7E24Q6IFN5 339 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 CDC73Q6P1J9 531 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 SHQ1Q6PI26 577 aaKnown RBP13.83□□□□□ -0.2
DDX55-202ENST00000354291 DEF8Q6ZN54 512 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 MTERF4Q7Z6M4 381 aaKnown RBP13.83□□□□□ -0.2
DDX55-202ENST00000354291 SVOPLQ8N434 492 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 MREGQ8N565 214 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 WDR31Q8NA23 367 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ZNF527Q8NB42 609 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 PHOSPHO1Q8TCT1 267 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ADAMTS15Q8TE58 950 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 CDS1Q92903 461 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms