RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 HHATLQ9HCP6 504 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 IL20RAQ9UHF4 553 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 FARSAQ9Y285 508 aaKnown RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 RPL36Q9Y3U8 105 aaKnown RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 AHCTF1Q8WYP5 2266 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 SNTNA6NMZ2 147 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 ADAM10O14672 748 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SURF4O15260 269 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SEC14L2O76054 403 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SLC15A1P46059 708 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SLC9A3P48764 834 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
VIM-201ENST00000224237 NTRK2Q16620 822 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 DUSP19Q8WTR2 217 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 RORBQ92753 470 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 NACC2Q96BF6 587 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 PLEKHA8Q96JA3 519 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 LHPPQ9H008 270 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 IGKV1D-42A0A075B6H8 117 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 TRAV27A0A087WT01 109 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 ZNF99A8MXY4 864 aaPredicted RBP16.54■□□□□ 0.24
VIM-201ENST00000224237 BHLHE40O14503 412 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 GMFGO60234 142 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 PTP4A3O75365 173 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 DKK1O94907 266 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 CH25HO95992 272 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 FTH1P19P0C7X4 201 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 TACR3P29371 465 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 C21orf33P30042 268 aaPredicted RBP16.54■□□□□ 0.24
VIM-201ENST00000224237 MASP1P48740 699 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 ST3GAL4Q11206 333 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 CCDC81Q6ZN84 652 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 SPACA9Q96E40 222 aaPredicted RBP16.54■□□□□ 0.24
VIM-201ENST00000224237 ACOT13Q9NPJ3 140 aa16.54■□□□□ 0.24
VIM-201ENST00000224237 CNOT1A5YKK6 2376 aaKnown RBP16.54■□□□□ 0.24
VIM-201ENST00000224237 GVINP1Q7Z2Y8 2422 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 C17orf51A8MQB3 221 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 ITGA10O75578 1167 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 CELA2AP08217 269 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 GP1BBP13224 206 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 GRK5P34947 590 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 TBCEQ15813 527 aaPredicted RBP16.53■□□□□ 0.24
VIM-201ENST00000224237 TMEM44Q2T9K0 475 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 RTL4Q6ZR62 310 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 PPP1R32Q7Z5V6 425 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 CLVS1Q8IUQ0 354 aaPredicted RBP16.53■□□□□ 0.24
VIM-201ENST00000224237 LNX2Q8N448 690 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 NLGN4YQ8NFZ3 816 aaPredicted RBP16.53■□□□□ 0.24
VIM-201ENST00000224237 OR51A7Q8NH64 312 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 FCGR1BQ92637 280 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 ZNF582Q96NG8 517 aaPredicted RBP16.53■□□□□ 0.24
VIM-201ENST00000224237 KLHDC3Q9BQ90 382 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 B3GNT4Q9C0J1 378 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 ZNF160Q9HCG1 818 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 KLRF1Q9NZS2 232 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 GPR52Q9Y2T5 361 aa16.53■□□□□ 0.24
VIM-201ENST00000224237 C21orf140B9A014 251 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 PRODHO43272 600 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 STSP08842 583 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 DBTP11182 482 aaKnown RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 ICAM2P13598 275 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 OTX2P32243 289 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 MAP2K4P45985 399 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 GAS1P54826 345 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 SUMO3P55854 103 aaPredicted RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 ZNF91Q05481 1191 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 TOMM34Q15785 309 aaPredicted RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 THSD4Q6ZMP0 1018 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 BCDIN3DQ7Z5W3 292 aaKnown RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 ERI1Q8IV48 349 aaKnown RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 ZNF420Q8TAQ5 688 aaPredicted RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 GPR119Q8TDV5 335 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 ZNF524Q96C55 264 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 IFT27Q9BW83 186 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 GPR87Q9BY21 358 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 FAM117AQ9C073 453 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 RYDENQ9NUL5 291 aaKnown RBP16.52■□□□□ 0.24
VIM-201ENST00000224237 BAIAP2Q9UQB8 552 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 ZNF337Q9Y3M9 751 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 FREM2Q5SZK8 3169 aa16.52■□□□□ 0.24
VIM-201ENST00000224237 MASP2O00187 686 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 TRMUO75648 421 aaKnown RBP16.52■□□□□ 0.23
VIM-201ENST00000224237 OR7A10O76100 309 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 INMTO95050 263 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 TNFSF15O95150 251 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 DCKP27707 260 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 SLC6A6P31641 620 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 DNASE1L3Q13609 305 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 QPRTQ15274 297 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 SLC46A3Q7Z3Q1 461 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 ANKK1Q8NFD2 765 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 OR10G3Q8NGC4 313 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 C9orf43Q8TAL5 461 aaPredicted RBP16.52■□□□□ 0.23
VIM-201ENST00000224237 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 MCCC2Q9HCC0 563 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 GALNT9Q9HCQ5 603 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 TAS2R10Q9NYW0 307 aa16.52■□□□□ 0.23
VIM-201ENST00000224237 OSGIN1Q9UJX0 560 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms