RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SPHARQ15513 63 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZNF141Q15928 474 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 KLHL26Q53HC5 615 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ULK3Q6PHR2 472 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CXXC5Q7LFL8 322 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 BTLAQ7Z6A9 289 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD37Q7Z713 158 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 FAM98AQ8NCA5 519 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 GALNT6Q8NCL4 622 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR52E2Q8NGJ4 325 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR5M1Q8NGP8 315 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZNF420Q8TAQ5 688 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 TMEM163Q8TC26 289 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OSTF1Q92882 214 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 C3orf49Q96BT1 292 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 YIPF6Q96EC8 236 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZHX1-C8orf76Q96EF9 292 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 KTI12Q96EK9 354 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 MOGAT1Q96PD6 335 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TSSK2Q96PF2 358 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SECISBP2Q96T21 854 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 TAPBPLQ9BX59 468 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TRIM2Q9C040 744 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SLC25A19Q9HC21 320 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PLCXD1Q9NUJ7 323 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD10Q9NXR5 420 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SIGLEC7Q9Y286 467 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PTRH2Q9Y3E5 179 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 B3GALT1Q9Y5Z6 326 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SPIN1Q9Y657 262 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 CDH10Q9Y6N8 788 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MAP1BP46821 2468 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 MCIDASD6RGH6 385 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 H3BSH0 61 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PLD2O14939 933 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR2J2O76002 312 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 IL33O95760 270 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TBXA2RP21731 343 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 AHCYP23526 432 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 MST1P26927 711 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 AQP2P41181 271 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 NAA10P41227 235 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 RPS27P42677 84 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SERPINB10P48595 397 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RGS6P49758 472 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CSNK2BP67870 215 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TUBA3CQ13748 450 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 BTBD16Q32M84 506 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PRAMEF20Q5VT98 475 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC23A3Q6PIS1 610 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 MAMSTRQ6ZN01 415 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OVCH1Q7RTY7 1134 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNF550Q7Z398 422 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ADCK1Q86TW2 530 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KMT5CQ86Y97 462 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD13BQ86YJ7 626 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLITRK4Q8IW52 837 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 LINC00471Q8N535 108 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 FAM26EQ8N5C1 309 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 APCDD1LQ8NCL9 501 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 AGBL5Q8NDL9 886 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PSD4Q8NDX1 1056 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 NLGN4YQ8NFZ3 816 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR7G1Q8NGA0 311 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR10H4Q8NGA5 316 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR14A16Q8NHC5 309 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 MOSPD2Q8NHP6 518 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CEP76Q8TAP6 659 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZPLD1Q8TCW7 415 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PTP4A1Q93096 173 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RASD2Q96D21 266 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZMYND19Q96E35 227 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZC3H10Q96K80 434 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SIGLEC11Q96RL6 698 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 LPAR4Q99677 370 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TM9SF2Q99805 663 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR11A1Q9GZK7 315 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 C6orf62Q9GZU0 229 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 RACGAP1Q9H0H5 632 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 DCSTAMPQ9H295 470 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TMEM185BQ9H7F4 350 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CHCHD3Q9NX63 227 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC39A1Q9NY26 324 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 MED11Q9P086 117 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PISDQ9UG56 409 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SRPK3Q9UPE1 567 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PCDHGB1Q9Y5G3 927 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TP53BP1Q12888 1972 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SH3D21A4FU49 640 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 FRG2CA6NGY1 282 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PRODHO43272 600 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KLF4O43474 513 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 LALBAP00709 142 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KLK3P07288 261 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 MYL12AP19105 171 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC15A1P46059 708 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 BMXP51813 675 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 FOXK1P85037 733 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms