RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MAPK11Q15759 364 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 AGKQ53H12 422 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 MRPL2Q5T653 305 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 GRINAQ7Z429 371 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 STK32CQ86UX6 486 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 SLC38A5Q8WUX1 472 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 WFIKKN1Q96NZ8 548 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 CCDC106Q9BWC9 280 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 RAD21L1Q9H4I0 556 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 CACYBPQ9HB71 228 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 THUMPD1Q9NXG2 353 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 KLHL28Q9NXS3 571 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 DCTN4Q9UJW0 460 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 TESMINQ9Y4I5 508 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 SPIN1Q9Y657 262 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 AP3D1O14617 1153 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 ADAM11O75078 769 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 PRKD3O94806 890 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 TFPTP0C1Z6 253 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 NCF2P19878 526 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-204ENST00000599398 ENPP1P22413 925 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 PCYT1AP49585 367 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 SQLEQ14534 574 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 RGNQ15493 299 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 SYT14P1Q58G82 188 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 RPS26P11Q5JNZ5 115 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-204ENST00000599398 TUSC5Q8IXB3 177 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 OR52P1PQ8NH57 321 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 SLC25A43Q8WUT9 341 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-204ENST00000599398 TMEM19Q96HH6 336 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 NPHS2Q9NP85 383 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 CHRNA9Q9UGM1 479 aa20.16■□□□□ 0.82
CCDC9-204ENST00000599398 GOSR1O95249 250 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 UQCRBP14927 111 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 CCNA2P20248 432 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 CCKARP32238 428 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 ATP4BP51164 291 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 LIN52Q52LA3 116 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 ZNF550Q7Z398 422 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 VRK2Q86Y07 508 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 SLC43A2Q8N370 569 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 ZC3HAV1LQ96H79 300 aaKnown RBP20.15■□□□□ 0.82
CCDC9-204ENST00000599398 LIME1Q9H400 295 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 FANCFQ9NPI8 374 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 RLIMQ9NVW2 624 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 ZNF226Q9NYT6 803 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 KLHL13Q9P2N7 655 aa20.15■□□□□ 0.82
CCDC9-204ENST00000599398 FREM1Q5H8C1 2179 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 DSPPQ9NZW4 1301 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 CFAP73A6NFT4 308 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 SULT2B1O00204 365 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 EDF1O60869 148 aaKnown RBP20.14■□□□□ 0.81
CCDC9-204ENST00000599398 NUDT7P0C024 238 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 DIO1P49895 249 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 CSNK2A1P68400 391 aaPredicted RBP20.14■□□□□ 0.81
CCDC9-204ENST00000599398 IRX1P78414 480 aaPredicted RBP20.14■□□□□ 0.81
CCDC9-204ENST00000599398 FADDQ13158 208 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 PAGE3Q5JUK9 113 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 ANKRD34AQ69YU3 496 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF836Q6ZNA1 936 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 TMPPEQ6ZT21 453 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 BEND4Q6ZU67 534 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 DNAJA3Q96EY1 480 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 RABEP2Q9H5N1 569 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 SLC25A37Q9NYZ2 338 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 SLAMF8Q9P0V8 285 aa20.14■□□□□ 0.81
CCDC9-204ENST00000599398 CELSR1Q9NYQ6 3014 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 A0A0G2JPF8 293 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HNRNPCL2B2RXH8 293 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HNRNPCL3B7ZW38 293 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HNRNPCL1O60812 293 aaKnown RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HRGP04196 525 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 YES1P07947 543 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HNRNPCL4P0DMR1 293 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HOXB9P17482 250 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 HTR3AP46098 478 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 EPS8Q12929 822 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 LARS2Q15031 903 aaKnown RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 LRIF1Q5T3J3 769 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 NUFIP2Q7Z417 695 aaKnown RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF440Q8IYI8 595 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 MAL2Q969L2 176 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 GP6Q9HCN6 339 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 TMEM45AQ9NWC5 275 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 C6orf203Q9P0P8 240 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 KLHL9Q9P2J3 617 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 ST6GALNAC2Q9UJ37 374 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 EDARQ9UNE0 448 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF232Q9UNY5 417 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 TRIM33Q9UPN9 1127 aa20.13■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF443Q9Y2A4 671 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-204ENST00000599398 TMED7-TICAM2A0A0A6YYA0 188 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 A0A0G2JND7 137 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 CDHR4A6H8M9 788 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 C5orf58C9J3I9 102 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 SMAD9O15198 467 aaKnown RBP20.12■□□□□ 0.81
CCDC9-204ENST00000599398 FESP07332 822 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 GKN3PP0CG01 181 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 KLK2P20151 261 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 POLR2HP52434 150 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms