RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SLC2A7Q6PXP3 512 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 LRRC74BQ6ZQY2 392 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 BEND4Q6ZU67 534 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF619Q8N2I2 560 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PNPT1Q8TCS8 783 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 TSPEARQ8WU66 669 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 TMEM171Q8WVE6 324 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 ZBTB8AQ96BR9 441 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 SH3YL1Q96HL8 342 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 SAP130Q9H0E3 1048 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 CXorf56Q9H5V9 222 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 CALML5Q9NZT1 146 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 MCTS1Q9ULC4 181 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PCDHB14Q9Y5E9 798 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 CLIC1O00299 241 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 DYNC1I1O14576 645 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF264O43296 627 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 GMFGO60234 142 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 KIAA0513O60268 411 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 UBL4AP11441 157 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 EIF1P41567 113 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 RAC1P63000 192 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 PPP2R2BQ00005 443 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 CD226Q15762 336 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 TYW3Q6IPR3 259 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 ESPNLQ6ZVH7 1005 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 EIF3MQ7L2H7 374 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF611Q8N823 705 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 TOR1AIP2Q8NFQ8 470 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 MDFIQ99750 246 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 MTHFD2LQ9H903 347 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 SLC6A13Q9NSD5 602 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 KLHL14Q9P2G3 628 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 P2RX2Q9UBL9 471 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 LEF1Q9UJU2 399 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 CLEC4AQ9UMR7 237 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 GPR52Q9Y2T5 361 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 NDUFAF1Q9Y375 327 aa15.65■□□□□ 0.1
SHKBP1-203ENST00000594298 NUP214P35658 2090 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 INAFM1C9JVW0 142 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 HS3ST1O14792 307 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 ANGPT2O15123 496 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 UGT2B17O75795 530 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 H6PDO95479 791 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 NUDT14O95848 222 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 PSMB1P20618 241 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 DSTNP60981 165 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 ZNF117Q03924 483 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 FADDQ13158 208 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 PLPPR5Q32ZL2 321 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 COX20Q5RI15 118 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 LRIF1Q5T3J3 769 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 PPP4R4Q6NUP7 873 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 FRRS1Q6ZNA5 592 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 OR2V1Q8NHB1 315 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 PLPPR2Q96GM1 343 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 NPAS1Q99742 590 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 ACTR6Q9GZN1 396 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 LAT2Q9GZY6 243 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 ZNF385DQ9H6B1 395 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC52A3Q9NQ40 469 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 MED17Q9NVC6 651 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 CORO2BQ9UQ03 480 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 SLC35A3Q9Y2D2 325 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 CARD8Q9Y2G2 431 aa15.64■□□□□ 0.09
SHKBP1-203ENST00000594298 EVPLLA8MZ36 301 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CXCL13O43927 109 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 SYNGR4O95473 234 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CSTAP01040 98 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CRISP3P54108 245 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CHRNEQ04844 493 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CBFBQ13951 182 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 CAPRIN1Q14444 709 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 RGNQ15493 299 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 SYPL1Q16563 259 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 GTF2IRD2BQ6EKJ0 949 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 GTF2IRD2Q86UP8 949 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 STK32CQ86UX6 486 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 ANKFN1Q8N957 763 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 OR5W2Q8NH69 310 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 RNF145Q96MT1 663 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 ICAM5Q9UMF0 924 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 ARID1AO14497 2285 aa15.63■□□□□ 0.09
SHKBP1-203ENST00000594298 TNFSF11O14788 317 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 CYP7B1O75881 506 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 PLAUP00749 431 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 C1QCP02747 245 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 ETFAP13804 333 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 NID1P14543 1247 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 ME2P23368 584 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 ADH6P28332 368 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 AGTR1P30556 359 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 MVDP53602 400 aa15.62■□□□□ 0.09
SHKBP1-203ENST00000594298 FUT5Q11128 374 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms