RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C3orf49Q96BT1 292 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 TBCCD1Q9NVR7 557 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 ICAM5Q9UMF0 924 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 SF3B6Q9Y3B4 125 aaKnown RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 WDFY4Q6ZS81 3184 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 SCDO00767 359 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 UTS2O95399 124 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 OCM2P0CE71 109 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 OCMP0CE72 109 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 UBL4AP11441 157 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PEPDP12955 493 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PNLIPP16233 465 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PMS2CLQ68D20 193 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 TMEM71Q6P5X7 295 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 B3GLCTQ6Y288 498 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 DAZLQ92904 295 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 KISS1RQ969F8 398 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 SGTBQ96EQ0 304 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 NUDT9Q9BW91 350 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 MUTYHQ9UIF7 546 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 MRTO4Q9UKD2 239 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 A0A075B6Q4 140 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ZC3H12DA2A288 527 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 SLC22A31A6NKX4 558 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 SLC30A4O14863 429 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 LALBAP00709 142 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF3P17036 446 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 GABRA5P31644 462 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 RPS25P62851 125 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF45Q02386 682 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ACSM1Q08AH1 577 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 SKP2Q13309 424 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF791Q3KP31 576 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PERM1Q5SV97 790 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 FCRLBQ6BAA4 426 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ARHGAP11AQ6P4F7 1023 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 TMPRSS9Q7Z410 1059 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PRSS58Q8IYP2 241 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 PHOSPHO1Q8TCT1 267 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ART5Q96L15 291 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 GAL3ST4Q96RP7 486 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 MROQ9BYG7 248 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 VN1R1Q9GZP7 353 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 EXOSC3Q9NQT5 275 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 ETAA1Q9NY74 926 aa16.63■□□□□ 0.25
SMPD3-211ENST00000568373 YARS2Q9Y2Z4 477 aaKnown RBP16.63■□□□□ 0.25
SMPD3-211ENST00000568373 C2orf92A0A1B0GVN3 265 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 PLD2O14939 933 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 CBFA2T3O75081 653 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 PPM1BO75688 479 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 HK1P19367 917 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 NOS3P29474 1203 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 DCAF7P61962 342 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 CRMP1Q14194 572 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 EBPQ15125 230 aaKnown RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 KLHL12Q53G59 568 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF322Q6U7Q0 402 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 APOOLQ6UXV4 268 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF574Q6ZN55 896 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 ACBD7Q8N6N7 88 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 BARHL1Q9BZE3 327 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 TOR4AQ9NXH8 423 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 CRNNQ9UBG3 495 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 DAPK2Q9UIK4 370 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 MKL2Q9ULH7 1088 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 ATXN7L1Q9ULK2 861 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-211ENST00000568373 BDP1A6H8Y1 2624 aa16.62■□□□□ 0.25
SMPD3-211ENST00000568373 A0A1B0GTQ1 180 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CCDC182A6NF36 153 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 C12orf71A8MTZ7 269 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 OIP5O43482 229 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 NDUFB2O95178 105 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SLC9A3P48764 834 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 RORCP51449 518 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 NR0B2Q15466 257 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 C22orf42Q6IC83 251 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 WBP2NLQ6ICG8 309 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 GUSBP11Q6P575 273 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 C9orf40Q8IXQ3 194 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 ZFP41Q8N8Y5 198 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SPRYD4Q8WW59 207 aaPredicted RBP16.61■□□□□ 0.25
SMPD3-211ENST00000568373 C1GALT1C1Q96EU7 318 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CCNL2Q96S94 520 aaPredicted RBP16.61■□□□□ 0.25
SMPD3-211ENST00000568373 ADOQ96SZ5 270 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 TEAD3Q99594 435 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 TM9SF2Q99805 663 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 KCNS3Q9BQ31 491 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SLC19A3Q9BZV2 496 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SNTG1Q9NSN8 517 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 QPCTLQ9NXS2 382 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 PILRBQ9UKJ0 227 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SRPK3Q9UPE1 567 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CAB39Q9Y376 341 aaPredicted RBP16.61■□□□□ 0.25
SMPD3-211ENST00000568373 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CPED1A4D0V7 1026 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF264O43296 627 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 IFNGP01579 166 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 IL1AP01583 271 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms