RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 REEP3Q6NUK4 255 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 C3orf33Q6P1S2 294 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 GRINAQ7Z429 371 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 TMEM200AQ86VY9 491 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 KRT73Q86Y46 540 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 DMRTC2Q8IXT2 367 aaPredicted RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 CMIPQ8IY22 773 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 POU5F2Q8N7G0 328 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ZNF610Q8N9Z0 462 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 OR10A6Q8NH74 314 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 STON2Q8WXE9 905 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 STARD4Q96DR4 205 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ANKRD27Q96NW4 1050 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 UCN2Q96RP3 112 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 SPOCK3Q9BQ16 436 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CPPED1Q9BRF8 314 aaPredicted RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 SLC39A3Q9BRY0 314 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 OR11A1Q9GZK7 315 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ENKD1Q9H0I2 346 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 PIGMQ9H3S5 423 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 RNF122Q9H9V4 155 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 TMED7Q9Y3B3 224 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 EMC9Q9Y3B6 208 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 SPIN1Q9Y657 262 aaPredicted RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 CAPN7Q9Y6W3 813 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CELSR2Q9HCU4 2923 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 HEATR5AQ86XA9 2040 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 NBPF19A0A087WUL8 3843 aa9.9□□□□□ -0.83
DDB1-222ENST00000543627 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.83
DDB1-222ENST00000543627 DOCK7Q96N67 2140 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 CDHR4A6H8M9 788 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 TUBAL3A6NHL2 446 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 FBP2O00757 339 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 TNFSF13O75888 250 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 NTN1O95631 604 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ARAFP10398 606 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 PRG2P13727 222 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 HOXB9P17482 250 aaPredicted RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 RPS4Y1P22090 263 aaKnown RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 ENPP1P22413 925 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 KIR2DL2P43627 348 aaPredicted RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 EEF1A1P68104 462 aaKnown RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 EPS8Q12929 822 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 BNIP2Q12982 314 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SYT14P1Q58G82 188 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SLC25A53Q5H9E4 307 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 TMEM201Q5SNT2 666 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 EEF1A1P5Q5VTE0 462 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ANKRD34AQ69YU3 496 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 FCRLAQ7L513 359 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ZNF550Q7Z398 422 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SERPINA11Q86U17 422 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 KIF18BQ86Y91 864 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ZNF440Q8IYI8 595 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SMYD1Q8NB12 490 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 FAM71CQ8NEG0 241 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SLC26A7Q8TE54 656 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ABHD3Q8WU67 409 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 OIT3Q8WWZ8 545 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 PMM1Q92871 262 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 CPNE4Q96A23 557 aaPredicted RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 ADGRG7Q96K78 797 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ZNF317Q96PQ6 595 aaPredicted RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 ZNF607Q96SK3 696 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ECSITQ9BQ95 431 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SPATA5L1Q9BVQ7 753 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 PRR14Q9BWN1 585 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 SPATA9Q9BWV2 254 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 KLHL4Q9C0H6 718 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 EXOSC3Q9NQT5 275 aaKnown RBP9.89□□□□□ -0.83
DDB1-222ENST00000543627 GALNT8Q9NY28 637 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 CRIM1Q9NZV1 1036 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 RPS6KB2Q9UBS0 482 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 CHRNA9Q9UGM1 479 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 ANGPT4Q9Y264 503 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 MED12LQ86YW9 2145 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 HCFC1P51610 2035 aa9.89□□□□□ -0.83
DDB1-222ENST00000543627 TRBV5-3A0A0A0MS03 114 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 TMEM72A0PK05 275 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 AIM2O14862 343 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 CASKO14936 926 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 CCDC22O60826 627 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 SERPINB7O75635 380 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 PRKD3O94806 890 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 OPN1SWP03999 348 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 CRHP06850 196 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 THBS1P07996 1170 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 POU2F1P14859 743 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 GPX2P18283 190 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 KLK2P20151 261 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 SLC1A3P43003 542 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 DIO1P49895 249 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 POLR2HP52434 150 aaKnown RBP9.88□□□□□ -0.83
DDB1-222ENST00000543627 PLAURQ03405 335 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 FAM27E3Q08E93 113 aa9.88□□□□□ -0.83
DDB1-222ENST00000543627 FOXD4Q12950 439 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms