RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 SH3YL1Q96HL8 342 aaPredicted RBP3.99□□□□□ -1.77
CTNND1-226ENST00000530720 KLHL15Q96M94 604 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 MS4A4EQ96PG1 132 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 BBS4Q96RK4 519 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 PSD2Q9BQI7 771 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
CTNND1-226ENST00000530720 TXLNGYQ9BZA5 131 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 TBL1XR1Q9BZK7 514 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 C12orf65Q9H3J6 166 aaKnown RBP3.99□□□□□ -1.77
CTNND1-226ENST00000530720 TUBB1Q9H4B7 451 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 CXorf36Q9H7Y0 433 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 BCO1Q9HAY6 547 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 GP6Q9HCN6 339 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 MID1IP1Q9NPA3 183 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 EQTNQ9NQ60 294 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 SDHAF3Q9NRP4 125 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 GLRX2Q9NS18 164 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 GIMAP4Q9NUV9 329 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 SENP1Q9P0U3 644 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 PRSS50Q9UI38 385 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 FBXO9Q9UK97 447 aaPredicted RBP3.99□□□□□ -1.77
CTNND1-226ENST00000530720 YLPM1P49750 1951 aaKnown RBP3.99□□□□□ -1.77
CTNND1-226ENST00000530720 TLN2Q9Y4G6 2542 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 CSPG4Q6UVK1 2322 aa3.99□□□□□ -1.77
CTNND1-226ENST00000530720 USF3Q68DE3 2245 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 FREM1Q5H8C1 2179 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 A0A087WUV0 522 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 IGHV3-15A0A0B4J1V0 119 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 NPIPA5A0A0B4J1W7 369 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CENPVL1A0A0U1RR11 272 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 EXOC1LA0A1B0GW35 172 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 A0A1W2PPM1 405 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 A0A1W2PQD3 144 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 RNF212BA8MTL3 300 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 E7EQL1 145 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 NPIPA7E9PJI5 369 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SMAD9O15198 467 aaKnown RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CLOCKO15516 846 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PHF1O43189 567 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 RIPK2O43353 540 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 BCAS1O75363 584 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SNUPNO95149 360 aaKnown RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 KCNH1O95259 989 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PGM3O95394 542 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 H6PDO95479 791 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PLGP00747 810 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ADAP00813 363 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CD3EP07766 207 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ABHD2P08910 425 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 NPIPA8P0DM63 369 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PRPS2P11908 318 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 TNFRSF1AP19438 455 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 EFNA1P20827 205 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CD247P20963 164 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PTNP21246 168 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 IGHV1-2P23083 117 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ELK4P28324 431 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 NTSP30990 170 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CASQ1P31415 396 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ARRB2P32121 409 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SFTPDP35247 375 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 IDUAP35475 653 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 OR3A2P47893 321 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PSMD4P55036 377 aaKnown RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CTBP2P56545 445 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 C21orf58P58505 322 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 UGT3A2Q3SY77 523 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 RFTN2Q52LD8 501 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 KLHL26Q53HC5 615 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SLC25A53Q5H9E4 307 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SPDYAQ5MJ70 313 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 TEX35Q5T0J7 233 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 C6orf52Q5T4I8 152 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CLEC6AQ6EIG7 209 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ZYG11AQ6WRX3 759 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 RNF165Q6ZSG1 346 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 Q6ZT83 130 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 LCA5Q86VQ0 697 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SLC22A9Q8IVM8 553 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 MMGT1Q8N4V1 131 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CEP112Q8N8E3 955 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 BANPQ8N9N5 519 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CDRT4Q8N9R6 151 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 STEAP2Q8NFT2 490 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CLHC1Q8NHS4 586 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 B4GALNT2Q8NHY0 566 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 PSMA8Q8TAA3 256 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CDS1Q92903 461 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CPNE4Q96A23 557 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 FAM120BQ96EK7 910 aaKnown RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ZBED6CLQ96FA7 236 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ZNF300Q96RE9 604 aaPredicted RBP3.98□□□□□ -1.77
CTNND1-226ENST00000530720 FMO2Q99518 471 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 CCT7Q99832 543 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 POTEKPQ9BYX7 375 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 SERHL2Q9H4I8 314 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 REEP4Q9H6H4 257 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 IFT22Q9H7X7 185 aa3.98□□□□□ -1.77
CTNND1-226ENST00000530720 ANKZF1Q9H8Y5 726 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms