RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 UMPSP11172 480 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CDK4P11802 303 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RNH1P13489 461 aaKnown RBP4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ZNF24P17028 368 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 BCL3P20749 454 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 KITLGP21583 273 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 BMI1P35226 326 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 LEPP41159 167 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RAB9AP51151 201 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ATP4BP51164 291 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TMEM50BP56557 158 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SLC8A3P57103 927 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 MAB21L1Q13394 359 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ILKQ13418 452 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PLCXD3Q63HM9 321 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SLC22A10Q63ZE4 541 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ARMCX5Q6P1M9 558 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SSX9Q7RTT3 188 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RNF130Q86XS8 419 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 FBXL16Q8N461 479 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 OR4F6Q8NGB9 312 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ADAMTS16Q8TE57 1224 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 NRGNQ92686 78 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TOMM40LQ969M1 308 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 MS4A14Q96JA4 679 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PRRC1Q96M27 445 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CYP2S1Q96SQ9 504 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CNN2Q99439 309 aaKnown RBP4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TM2D1Q9BX74 207 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TEKT3Q9BXF9 490 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 STMN4Q9H169 189 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 BLZF1Q9H2G9 400 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PPDPFQ9H3Y8 114 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 XKR8Q9H6D3 395 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 FGF22Q9HCT0 170 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 EXOSC3Q9NQT5 275 aaKnown RBP4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 FAM120CQ9NX05 1096 aaKnown RBP4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 EHFQ9NZC4 300 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SPATA2Q9UM82 520 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 COMMD3-BMI1R4GMX3 469 aa4.02□□□□□ -1.77
RNU6-1004P-201ENST00000516584 A0A087X002 238 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TRBV11-1A0A0K0K1C0 115 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 A0A1B0GUS0 222 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TCRBV9S1A1TA0A576 114 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PP2D1A8MPX8 630 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ERVV-2B6SEH9 535 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PSTPIP1O43586 416 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PRKYO43930 277 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PAHP00439 452 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CSTAP01040 98 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SERPINB2P05120 415 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CD1BP29016 333 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 YWHABP31946 246 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 OTX1P32242 354 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 HMGCLP35914 325 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ETV5P41161 510 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 XCR1P46094 333 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 DAP3P51398 398 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 BCAP31P51572 246 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PRKXP51817 358 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CRYBB1P53674 252 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RPL36AP83881 106 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 LIPEQ05469 1076 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 CALCOCO2Q13137 446 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PPIL2Q13356 520 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 DUSP7Q16829 419 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 GLYR1Q49A26 553 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 VPS26BQ4G0F5 336 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RFWD3Q6PCD5 774 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 HSDL2Q6YN16 418 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 NIPA1Q7RTP0 329 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 DCUN1D3Q8IWE4 304 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 GABRG1Q8N1C3 465 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ACMSDQ8TDX5 336 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 KIFAP3Q92845 792 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SGK3Q96BR1 496 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 TMEM80Q96HE8 168 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 C9orf85Q96MD7 179 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ZNF578Q96N58 590 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ZNF670Q9BS34 389 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 NAT10Q9H0A0 1025 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 ILKAPQ9H0C8 392 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 HAUS4Q9H6D7 363 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 NANSQ9NR45 359 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 C20orf96Q9NUD7 363 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PEF1Q9UBV8 284 aaKnown RBP4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PRODH2Q9UF12 536 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 PHF11Q9UIL8 331 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 RNF24Q9Y225 148 aa4.01□□□□□ -1.77
RNU6-1004P-201ENST00000516584 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SMCO2A6NFE2 343 aa4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 FOXI3A8MTJ6 420 aaPredicted RBP4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 NTN3O00634 580 aaPredicted RBP4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 OR2F2O95006 317 aa4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 OXSR1O95747 527 aaPredicted RBP4□□□□□ -1.77
RNU6-1004P-201ENST00000516584 SEMA4FO95754 770 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms