RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 NEURL3Q96EH8 262 aa9.69□□□□□ -0.86
RNF4-212ENST00000509258 TRMT61AQ96FX7 289 aaKnown RBP9.69□□□□□ -0.86
RNF4-212ENST00000509258 ACTR6Q9GZN1 396 aa9.69□□□□□ -0.86
RNF4-212ENST00000509258 LAT2Q9GZY6 243 aa9.69□□□□□ -0.86
RNF4-212ENST00000509258 GP6Q9HCN6 339 aa9.69□□□□□ -0.86
RNF4-212ENST00000509258 GPR45Q9Y5Y3 372 aa9.69□□□□□ -0.86
RNF4-212ENST00000509258 GPC6Q9Y625 555 aaPredicted RBP9.69□□□□□ -0.86
RNF4-212ENST00000509258 PRSS51A0A1B0GVH4 220 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 ZNF814B7Z6K7 855 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 E9PBE3 544 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 AP3D1O14617 1153 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 HS3ST1O14792 307 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SMAD9O15198 467 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 RAMP1O60894 148 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 STX11O75558 287 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 CYP7B1O75881 506 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 UBTFL6P0CB48 400 aaPredicted RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 UQCRC2P22695 453 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 IL32P24001 234 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 NTF4P34130 210 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 ATP5J2P56134 94 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SESN3P58005 492 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 MAGOHP61326 146 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 RPS4XP62701 263 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 ETFDHQ16134 617 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SYPL1Q16563 259 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 GTDC1Q4AE62 458 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 TIGD2Q4W5G0 525 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SLC9B1Q4ZJI4 515 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 CXXC5Q7LFL8 322 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 GABRG1Q8N1C3 465 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SPATA3Q8NHX4 192 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 CNOT9Q92600 299 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 ZNF75CPQ92670 426 aaPredicted RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 MRGPRX4Q96LA9 322 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 CCDC115Q96NT0 180 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 OR52B2Q96RD2 323 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 ZNF300Q96RE9 604 aaPredicted RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 SLC35A5Q9BS91 424 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 SAP130Q9H0E3 1048 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 ESRP2Q9H6T0 727 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 KLHL13Q9P2N7 655 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 PRSS50Q9UI38 385 aa9.68□□□□□ -0.86
RNF4-212ENST00000509258 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
RNF4-212ENST00000509258 EIF4E2O60573 245 aaKnown RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 CSTAP01040 98 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 S100A3P33764 101 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 MVDP53602 400 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 SELENBP1Q13228 472 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 BEND6Q5SZJ8 279 aaPredicted RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 HHATQ5VTY9 493 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 AP1ARQ63HQ0 302 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 BHLHB9Q6PI77 547 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 FCRLAQ7L513 359 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 C16orf62Q7Z3J2 963 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 ZNF619Q8N2I2 560 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 SLC43A2Q8N370 569 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 OR9I1Q8NGQ6 314 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 RAB3IL1Q8TBN0 382 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 S100PBPQ96BU1 408 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 PSD2Q9BQI7 771 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 TMEM204Q9BSN7 226 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 RSPO3Q9BXY4 272 aaPredicted RBP9.67□□□□□ -0.86
RNF4-212ENST00000509258 OR11A1Q9GZK7 315 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 SLC38A1Q9H2H9 487 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 TMBIM4Q9HC24 238 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 CTPS2Q9NRF8 586 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 ACER3Q9NUN7 267 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 BTNL2Q9UIR0 455 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 WDR45Q9Y484 360 aa9.67□□□□□ -0.86
RNF4-212ENST00000509258 CCDC154A6NI56 674 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 CRLF1O75462 422 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 PRKD3O94806 890 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 PGRP06401 933 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 CD3EP07766 207 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 RPS4Y1P22090 263 aaKnown RBP9.66□□□□□ -0.86
RNF4-212ENST00000509258 SLC7A1P30825 629 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 RYKP34925 604 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 KHKP50053 298 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 DMTNQ08495 405 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 MERTKQ12866 999 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 CBFBQ13951 182 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 VEZF1Q14119 521 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 ANXA8L1Q5VT79 327 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 AKAP1Q92667 903 aaKnown RBP eCLIP9.66□□□□□ -0.86
RNF4-212ENST00000509258 FBXW5Q969U6 566 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 GTPBP3Q969Y2 492 aaKnown RBP9.66□□□□□ -0.86
RNF4-212ENST00000509258 MAELQ96JY0 434 aaKnown RBP9.66□□□□□ -0.86
RNF4-212ENST00000509258 ARL5BQ96KC2 179 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 OR5B2Q96R09 309 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 CCDC106Q9BWC9 280 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 POTEKPQ9BYX7 375 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms