RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 UBTD1Q9HAC8 227 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 POLE3Q9NRF9 147 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 SDR39U1Q9NRG7 319 aaPredicted RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 ACER3Q9NUN7 267 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 RLIMQ9NVW2 624 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 ZNF226Q9NYT6 803 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 KLHL13Q9P2N7 655 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 DSCAMO60469 2012 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 ITPR3Q14573 2671 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 TMEM72A0PK05 275 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 AGAP5A6NIR3 686 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 GJE1A6NN92 205 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 KLF11O14901 512 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 PRKD3O94806 890 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ADAP00813 363 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 IL6P05231 212 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 BCHEP06276 602 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 FESP07332 822 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 GKN3PP0CG01 181 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 NR2F1P10589 423 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 CRATP43155 626 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 IDH3AP50213 366 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 RAC3P60763 192 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ADAM8P78325 824 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 RASGEF1BQ0VAM2 473 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 FOXD4Q12950 439 aaPredicted RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 SYT14P1Q58G82 188 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 MRPL2Q5T653 305 aaKnown RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 C3orf33Q6P1S2 294 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ZNF836Q6ZNA1 936 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 LRRC74BQ6ZQY2 392 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 BEND4Q6ZU67 534 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ADGRG3Q86Y34 549 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 TGIF2LYQ8IUE0 185 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ARFGAP2Q8N6H7 521 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 TRIML2Q8N7C3 387 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 WDR60Q8WVS4 1066 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ST8SIA1Q92185 356 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ATP6V1G3Q96LB4 118 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 TRNT1Q96Q11 434 aaKnown RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ACTR6Q9GZN1 396 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
NELFE-213ENST00000494956 TPT1P8Q9HAU6 139 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 TIGARQ9NQ88 270 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ZIM2Q9NZV7 527 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 SLC35A3Q9Y2D2 325 aa9.43□□□□□ -0.9
NELFE-213ENST00000494956 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 SULT2B1O00204 365 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CYTIPO60759 359 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 ANP32DO95626 131 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 IGHV3-9P01782 118 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 YES1P07947 543 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CD99P14209 185 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 IL7RP16871 459 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 RPS4Y1P22090 263 aaKnown RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 NTF4P34130 210 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 PCYT1AP49585 367 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 RNPS1Q15287 305 aaKnown RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 GSTA3Q16772 222 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 C6orf10Q5SRN2 563 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 AP1ARQ63HQ0 302 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 TMPPEQ6ZT21 453 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 FUNDC1Q8IVP5 155 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CCDC103Q8IW40 242 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 GABRG1Q8N1C3 465 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 C10orf111Q8N326 155 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CLIP4Q8N3C7 705 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 GLB1L3Q8NCI6 653 aaPredicted RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 LRRC8CQ8TDW0 803 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 TMEM234Q8WY98 164 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 GTF2H4Q92759 462 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 MAL2Q969L2 176 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 S100PBPQ96BU1 408 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 PLPPR2Q96GM1 343 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 C7orf26Q96N11 449 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 ALPK1Q96QP1 1244 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 RSPO3Q9BXY4 272 aaPredicted RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 PAIP1Q9H074 479 aaKnown RBP9.42□□□□□ -0.9
NELFE-213ENST00000494956 SERINC1Q9NRX5 453 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 SLAMF8Q9P0V8 285 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CHRNA9Q9UGM1 479 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 OSGIN1Q9UJX0 560 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 CHST2Q9Y4C5 530 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
NELFE-213ENST00000494956 ROS1P08922 2347 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 TMED7-TICAM2A0A0A6YYA0 188 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 FAM234BA2RU67 622 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 NR5A2O00482 541 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 LYZL6O75951 148 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 GOSR1O95249 250 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 KRT75O95678 551 aa9.41□□□□□ -0.9
NELFE-213ENST00000494956 GUSBP08236 651 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms