RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 AP3D1O14617 1153 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 PRKD3O94806 890 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 HRGP04196 525 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 BCHEP06276 602 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 DBIP07108 87 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 NUDT7P0C024 238 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 PABPC4LP0CB38 370 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 KLK2P20151 261 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 APOBEC1P41238 236 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 IDH2P48735 452 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 RAC3P60763 192 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 RNPS1Q15287 305 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 POU4F3Q15319 338 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 RGNQ15493 299 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 TESK1Q15569 626 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 SYT14P1Q58G82 188 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 MRPL2Q5T653 305 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 FBXW10Q5XX13 1052 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 ANKRD34AQ69YU3 496 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 NUFIP2Q7Z417 695 aaKnown RBP11.5□□□□□ -0.57
HDAC1-209ENST00000484305 VRK2Q86Y07 508 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 ADGRG3Q86Y34 549 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 TUSC5Q8IXB3 177 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 MSRB3Q8IXL7 192 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 PMM1Q92871 262 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 KLHL4Q9C0H6 718 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 RLIMQ9NVW2 624 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 SLC25A37Q9NYZ2 338 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 DSPPQ9NZW4 1301 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 PRR14LQ5THK1 2151 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 A0A096LPI6 279 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 A0A1W2PPR1 153 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 CASKO14936 926 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 SIAH2O43255 324 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 EDF1O60869 148 aaKnown RBP11.49□□□□□ -0.57
HDAC1-209ENST00000484305 DIO1P49895 249 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 IST1P53990 364 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 CRISP3P54108 245 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 AGKQ53H12 422 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 TMEM201Q5SNT2 666 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 STAC2Q6ZMT1 411 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF836Q6ZNA1 936 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 TMPPEQ6ZT21 453 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF550Q7Z398 422 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 GRINAQ7Z429 371 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 PEX5LQ8IYB4 626 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 OR52P1PQ8NH57 321 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 SLC25A43Q8WUT9 341 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-209ENST00000484305 MAL2Q969L2 176 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 DNAJA3Q96EY1 480 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 TMEM19Q96HH6 336 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ARL5BQ96KC2 179 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 MED18Q9BUE0 208 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 OR11A1Q9GZK7 315 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 THUMPD1Q9NXG2 353 aaKnown RBP11.49□□□□□ -0.57
HDAC1-209ENST00000484305 CALML5Q9NZT1 146 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 KLHL13Q9P2N7 655 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 CHRNA9Q9UGM1 479 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ST6GALNAC2Q9UJ37 374 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 DCTN4Q9UJW0 460 aa11.49□□□□□ -0.57
HDAC1-209ENST00000484305 ING1Q9UK53 422 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-209ENST00000484305 F8P00451 2351 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 A0A0G2JPF8 293 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CDHR4A6H8M9 788 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CFAP73A6NFT4 308 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 HNRNPCL2B2RXH8 293 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 HNRNPCL3B7ZW38 293 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 SULT2B1O00204 365 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 SMAD9O15198 467 aaKnown RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 HNRNPCL1O60812 293 aaKnown RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 GOSR1O95249 250 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 YES1P07947 543 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 GKN3PP0CG01 181 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 HNRNPCL4P0DMR1 293 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 TFPIP10646 304 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 NCF2P19878 526 aaPredicted RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CCNA2P20248 432 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 ATP4BP51164 291 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 EPS8Q12929 822 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 GNA13Q14344 377 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 SQLEQ14534 574 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 LIN52Q52LA3 116 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 BEND4Q6ZU67 534 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 STK32CQ86UX6 486 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 C10orf111Q8N326 155 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 SLC43A2Q8N370 569 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 ZC3HAV1LQ96H79 300 aaKnown RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 RAD21L1Q9H4I0 556 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 GP6Q9HCN6 339 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 NPHS2Q9NP85 383 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms