RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NPIPA5A0A0B4J1W7 369 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM240BA0A1B0GVZ2 78 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 SMIM30A4D0T7 59 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 NPIPA7E9PJI5 369 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 CTNSO60931 367 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 NDUFB2O95178 105 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 NPIPA8P0DM63 369 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 SAGP10523 405 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 PVRP15151 417 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 SHC1P29353 583 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 RCVRNP35243 200 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 PBX2P40425 430 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ACTA2P62736 377 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ACTG2P63267 376 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 DAB2P98082 770 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 HSF2Q03933 536 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 BIKQ13323 160 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 INSL4Q14641 139 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 HSD17B12Q53GQ0 312 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 UNQ9370/PRO34162Q6UXP9 181 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 MED25Q71SY5 747 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 CDH24Q86UP0 819 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 GATAD2AQ86YP4 633 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 PLCZ1Q86YW0 608 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF595Q8IYB9 648 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF440Q8IYI8 595 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 Q8N9G6 341 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 OR10H4Q8NGA5 316 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 FAM174AQ8TBP5 190 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 LIPHQ8WWY8 451 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF285Q96NJ3 590 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 TNFRSF13CQ96RJ3 184 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 G6PC3Q9BUM1 346 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 RANGRFQ9HD47 186 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 RPRD1BQ9NQG5 326 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ABRACLQ9P1F3 81 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 EXTL2Q9UBQ6 330 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 MMP17Q9ULZ9 603 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 RBMX2Q9Y388 322 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ALG5Q9Y673 324 aa11.53□□□□□ -0.56
ECHDC1-209ENST00000454591 ZC3H12DA2A288 527 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 E9PI62 339 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 DVL2O14641 736 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 SRPX2O60687 465 aaPredicted RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 ADAM11O75078 769 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 REM1O75628 298 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 PPP1R3DO95685 299 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 SEMA4FO95754 770 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 IGKV1D-16P01601 117 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 NGFRP08138 427 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 UCHL1P09936 223 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 RNH1P13489 461 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 GABRG2P18507 467 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 NOS3P29474 1203 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 TALDO1P37837 337 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 ADH7P40394 386 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 PITPNBP48739 271 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 GZMKP49863 264 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 RPS4XP62701 263 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 E2F1Q01094 437 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 EIF2B5Q13144 721 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 SHHQ15465 462 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 KLHL12Q53G59 568 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 IDNKQ5T6J7 187 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 BICRALQ6AI39 1079 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 DPY19L2P2Q6ZN68 376 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 DGAT2L6Q6ZPD8 337 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 NUP54Q7Z3B4 507 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC22A18ASQ8N1D0 253 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 FAM71CQ8NEG0 241 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 OR13H1Q8NG92 308 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC37A2Q8TED4 501 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 RFT1Q96AA3 541 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 UPRTQ96BW1 309 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 MRPL48Q96GC5 212 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 C7orf50Q9BRJ6 194 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 GTPBP2Q9BX10 602 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 GON7Q9BXV9 100 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 CHRDQ9H2X0 955 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 NKX2-4Q9H2Z4 354 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 UCK1Q9HA47 277 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 MRPL39Q9NYK5 338 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 TRANK1O15050 2925 aa11.52□□□□□ -0.57
ECHDC1-209ENST00000454591 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
ECHDC1-209ENST00000454591 A0A087WUJ7 227 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms