RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RBM18Q96H35 190 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 HS6ST2Q96MM7 605 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 SECISBP2Q96T21 854 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 CD180Q99467 661 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 ARHGAP9Q9BRR9 750 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 TTYH2Q9BSA4 534 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 PRRG3Q9BZD7 231 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 LRRN3Q9H3W5 708 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 ISG20L2Q9H9L3 353 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 PLSCR3Q9NRY6 295 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 SSR3Q9UNL2 185 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 SIGLEC7Q9Y286 467 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 PEX16Q9Y5Y5 336 aa13.99□□□□□ -0.17
SCAMP4-202ENST00000409472 CABIN1Q9Y6J0 2220 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 RGS5O15539 181 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 AK1P00568 194 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 HTR1FP30939 366 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 CSNK1EP49674 416 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 EFNA3P52797 238 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 IGLV3-21P80748 117 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 RPL6Q02878 288 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 FHL1Q13642 323 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 ESCO2Q56NI9 601 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 GARNL3Q5VVW2 1013 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 KIRREL2Q6UWL6 708 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 LAPTM4BQ86VI4 370 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 CLDN22Q8N7P3 220 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 TMEM99Q8N816 258 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 CYB561A3Q8NBI2 242 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 OR4C3Q8NH37 302 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 C1GALT1C1Q96EU7 318 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 DMRTB1Q96MA1 342 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 TIMP4Q99727 224 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 NARFLQ9H6Q4 476 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 PCDHGB6Q9Y5F9 930 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 MPDZO75970 2070 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 SHISA3A0PJX4 238 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 CTNSO60931 367 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 NOS1APO75052 506 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 NSA2O95478 260 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 IGHA1P01876 353 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 BCKDHBP21953 392 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 AZGP1P25311 298 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 SDC2P34741 201 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 HNRNPA0Q13151 305 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 GXYLT1Q4G148 440 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 SPRYD4Q8WW59 207 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 GIMAP1Q8WWP7 306 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 ART5Q96L15 291 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 DGAT2Q96PD7 388 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 IFT27Q9BW83 186 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 POLHQ9Y253 713 aa13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 EXOSC1Q9Y3B2 195 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-202ENST00000409472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 LILRA5A6NI73 299 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 ARHGEF9O43307 516 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 SRPX2O60687 465 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 FMO6PO60774 539 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 PPP1R3DO95685 299 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 MRPL3P09001 348 aaKnown RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 IL7P13232 177 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 TPBGQ13641 420 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 CRTC2Q53ET0 693 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 GKN2Q86XP6 184 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 GATSQ8NAP1 163 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 ZSCAN1Q8NBB4 408 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 OR51Q1Q8NH59 317 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF285Q96NJ3 590 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 TMED9Q9BVK6 235 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 EXOGQ9Y2C4 368 aaKnown RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 MED31Q9Y3C7 131 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 V9GYH0 126 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 FER1L5A0AVI2 2057 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 UNC13CQ8NB66 2214 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 A0A0G2JMP0 313 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 HMX3A6NHT5 357 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 NPIPB9F8W1W9 429 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 J3QRE1 110 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 CHP2O43745 196 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 REM1O75628 298 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 IFNA16P05015 189 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 GYPBP06028 91 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 POU3F3P20264 500 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 OR1D4P47884 311 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 FOXK2Q01167 660 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 TBRG1Q3YBR2 411 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 PLK5Q496M5 336 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 KLHL12Q53G59 568 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 ALG10BQ5I7T1 473 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF517Q6ZMY9 492 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 GDPGP1Q6ZNW5 385 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 QSOX2Q6ZRP7 698 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 TMPRSS11FQ6ZWK6 438 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 SPATC1Q76KD6 591 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 OR52L1Q8NGH7 329 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 UFD1Q92890 307 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 RFKQ969G6 155 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms