RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SLC2A10O95528 541 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 LY86O95711 162 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 APEHP13798 732 aaKnown RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 HNRNPA2B1P22626 353 aaKnown RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 UQCRC2P22695 453 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 GIFP27352 417 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 GABRA5P31644 462 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 BTCP35070 178 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 PER3P56645 1201 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 GMFBP60983 142 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 MC2RQ01718 297 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 C3orf38Q5JPI3 329 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 TMED4Q7Z7H5 227 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 PAQR7Q86WK9 346 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SMRP1Q8NCR6 262 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 HAVCR2Q8TDQ0 301 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SETD7Q8WTS6 366 aaKnown RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 ZNF354BQ96LW1 612 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SMOC1Q9H4F8 434 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 HEXA-AS1Q9H8Q6 139 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 ISG20L2Q9H9L3 353 aaKnown RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 SIRT3Q9NTG7 399 aaPredicted RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 SIT1Q9Y3P8 196 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SIRT4Q9Y6E7 314 aaPredicted RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 COLEC10Q9Y6Z7 277 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SLC5A10A0PJK1 596 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 ZC3H12DA2A288 527 aaKnown RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 E9PI62 339 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 LAMTOR5O43504 91 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 SLC28A2O43868 658 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 C1orf105O95561 183 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 CBX7O95931 251 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 TNFP01375 233 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 ACP2P11117 423 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 NPR2P20594 1047 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 CBX5P45973 191 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 MTNR1AP48039 350 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 CDK5Q00535 292 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 HTR4Q13639 388 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 GRK1Q15835 563 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 AANATQ16613 207 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 DEFB134Q4QY38 66 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 RNLSQ5VYX0 342 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 TMEM81Q6P7N7 255 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 MORN4Q8NDC4 146 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 OR2I1PQ8NGU4 316 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 NR4A3Q92570 626 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 GAL3ST3Q96A11 431 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 RERGQ96A58 199 aaPredicted RBP8.46□□□□□ -1.05
TOP1-201ENST00000361337 RAB7BQ96AH8 199 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 NXPE2Q96DL1 559 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 TGM7Q96PF1 710 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 COMMD9Q9P000 198 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 MED11Q9P086 117 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 NTNG1Q9Y2I2 539 aa8.46□□□□□ -1.05
TOP1-201ENST00000361337 PLPP1O14494 284 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 SHOXO15266 292 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 TBXA2RP21731 343 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 DRD3P35462 400 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 SLC1A3P43003 542 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 OR10A3P58181 314 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 TNFRSF17Q02223 184 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 SLC3A1Q07837 685 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 CDC73Q6P1J9 531 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 CD200R1LQ6Q8B3 271 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 TEX261Q6UWH6 196 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 RELL2Q8NC24 303 aaPredicted RBP8.46□□□□□ -1.06
TOP1-201ENST00000361337 TMIEQ8NEW7 156 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 OR1E3Q8WZA6 343 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 NEURL3Q96EH8 262 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 INSM2Q96T92 566 aaPredicted RBP8.46□□□□□ -1.06
TOP1-201ENST00000361337 SDHAF2Q9NX18 166 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 AHSPQ9NZD4 102 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 ACAD8Q9UKU7 415 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 U3KQ87 197 aa8.46□□□□□ -1.06
TOP1-201ENST00000361337 SCN3AQ9NY46 2000 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 M0R036 132 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 PDGFBP01127 241 aaPredicted RBP8.45□□□□□ -1.06
TOP1-201ENST00000361337 EIF4EP06730 217 aaKnown RBP8.45□□□□□ -1.06
TOP1-201ENST00000361337 C1GALT1C1LP0DN25 315 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 PCSK2P16519 638 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 NOS3P29474 1203 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 SLC6A1P30531 599 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 TAP2Q03519 686 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 SF3A2Q15428 464 aaKnown RBP8.45□□□□□ -1.06
TOP1-201ENST00000361337 TSC22D1Q15714 1073 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 C3P1Q6ZMU1 363 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 RTL4Q6ZR62 310 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 PRSS42Q7Z5A4 293 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 NRSN1Q8IZ57 195 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 ANKRD53Q8N9V6 530 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 TMEM185AQ8NFB2 350 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 SPRYD4Q8WW59 207 aaPredicted RBP8.45□□□□□ -1.06
TOP1-201ENST00000361337 ADAMTS14Q8WXS8 1223 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 ZG16BQ96DA0 208 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 ZNF649Q9BS31 505 aa8.45□□□□□ -1.06
TOP1-201ENST00000361337 TMEM185BQ9H7F4 350 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms