RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 GTPBP8Q8N3Z3 284 aaPredicted RBP16.9■□□□□ 0.3
TSSC4-201ENST00000333256 POP5Q969H6 163 aaKnown RBP16.9■□□□□ 0.3
TSSC4-201ENST00000333256 DNAJA3Q96EY1 480 aa16.9■□□□□ 0.3
TSSC4-201ENST00000333256 MRGPRX4Q96LA9 322 aa16.9■□□□□ 0.3
TSSC4-201ENST00000333256 ADAM19Q9H013 955 aa16.9■□□□□ 0.3
TSSC4-201ENST00000333256 ZNF337Q9Y3M9 751 aa16.9■□□□□ 0.3
TSSC4-201ENST00000333256 KALRNO60229 2985 aa16.9■□□□□ 0.3
TSSC4-201ENST00000333256 ETV2O00321 342 aaPredicted RBP16.89■□□□□ 0.29
TSSC4-201ENST00000333256 RHCEP18577 417 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 SLC7A1P30825 629 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 STARP49675 285 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 SLC25A53Q5H9E4 307 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 ZNF613Q6PF04 617 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 ULK3Q6PHR2 472 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 WDR88Q6ZMY6 472 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 TRILQ7L0X0 811 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 ATG4DQ86TL0 474 aaPredicted RBP16.89■□□□□ 0.29
TSSC4-201ENST00000333256 CYP4Z1Q86W10 505 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 ADGRG3Q86Y34 549 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 P3H2Q8IVL5 708 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 OR52J3Q8NH60 311 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 FAR1Q8WVX9 515 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 SMPDL3BQ92485 455 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 NR4A3Q92570 626 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 PIP5K1AQ99755 562 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 PIGQQ9BRB3 760 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 FNDC11Q9BVV2 318 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 ACKR4Q9NPB9 350 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 MRPS18CQ9Y3D5 142 aaKnown RBP16.89■□□□□ 0.29
TSSC4-201ENST00000333256 AP4S1Q9Y587 144 aa16.89■□□□□ 0.29
TSSC4-201ENST00000333256 TMED7-TICAM2A0A0A6YYA0 188 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 TRGV5A0A0B4J1U4 118 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 OR5F1O95221 314 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 LYPD3O95274 346 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 EIF1P41567 113 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 POLR2HP52434 150 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 GFRA1P56159 465 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 SPIBQ01892 262 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 PPP1R8Q12972 351 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 DCST1Q5T197 706 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ZNF324BQ6AW86 544 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 PIWIL3Q7Z3Z3 882 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 NKAIN4Q8IVV8 208 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 PAPD5Q8NDF8 572 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 DNAJA4Q8WW22 397 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 SELENONQ9NZV5 590 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 TMED7Q9Y3B3 224 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 KMT2BQ9UMN6 2715 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 FREM3P0C091 2139 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 C7orf72A4D263 438 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ELOA3DA6NLF2 546 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 CST1P01037 141 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 PRB1P04280 392 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 CXCR1P25024 350 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 RRM2P31350 389 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ELF3P78545 371 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ELOA3BQ3SY89 546 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 GLYR1Q49A26 553 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ELOA3Q8NG57 546 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 NEIL3Q8TAT5 605 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 SLC38A4Q969I6 547 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 DUS3LQ96G46 650 aaKnown RBP16.88■□□□□ 0.29
TSSC4-201ENST00000333256 OR11A1Q9GZK7 315 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 MAN2C1Q9NTJ4 1040 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 SPRR3Q9UBC9 169 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 ACAD8Q9UKU7 415 aa16.88■□□□□ 0.29
TSSC4-201ENST00000333256 H3BNX3 289 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 CHP2O43745 196 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 SUSD5O60279 629 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 KRT36O76013 467 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 IGHG3P01860 377 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ZNF17P17021 662 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ADH6P28332 368 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 SHC1P29353 583 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 SFTPDP35247 375 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 APOBEC1P41238 236 aaKnown RBP16.87■□□□□ 0.29
TSSC4-201ENST00000333256 HTR3AP46098 478 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 DLX5P56178 289 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 LSM11P83369 360 aaKnown RBP eCLIP16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ST3GAL3Q11203 375 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 FGD3Q5JSP0 725 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ZNF605Q86T29 641 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 UBQLNLQ8IYU4 475 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 OFCC1Q8IZS5 231 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 LILRA2Q8N149 483 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 TMEM255BQ8WV15 326 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 STMN2Q93045 179 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 PRSS27Q9BQR3 290 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ARMC1Q9NVT9 282 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 VNN3Q9NY84 501 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 CHRNA9Q9UGM1 479 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 U3KQV3 271 aa16.87■□□□□ 0.29
TSSC4-201ENST00000333256 ZNF407Q9C0G0 2248 aa16.86■□□□□ 0.29
TSSC4-201ENST00000333256 A0A1B0GTH9 108 aa16.86■□□□□ 0.29
TSSC4-201ENST00000333256 TMEM72A0PK05 275 aa16.86■□□□□ 0.29
TSSC4-201ENST00000333256 ZC3H12DA2A288 527 aaKnown RBP16.86■□□□□ 0.29
TSSC4-201ENST00000333256 H0YC42 278 aa16.86■□□□□ 0.29
TSSC4-201ENST00000333256 H1F0P07305 194 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms