RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 IDO2Q6ZQW0 420 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ARHGAP39Q9C0H5 1083 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SULT1C2O00338 296 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 AGFG1P52594 562 aaKnown RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 EDDM3BP56851 147 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 TESK1Q15569 626 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 FAM69AQ5T7M9 428 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 HES5Q5TA89 166 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 FAM198BQ6UWH4 519 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 TSPYL5Q86VY4 417 aaPredicted RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 ENDOVQ8N8Q3 282 aaKnown RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR2M3Q8NG83 312 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 TIMD4Q96H15 378 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 DCLRE1CQ96SD1 692 aaKnown RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 NKX3-1Q99801 234 aaPredicted RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 LATO43561 262 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 LGI1O95970 557 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 TK1P04183 234 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 FGF3P11487 239 aaPredicted RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 AREGP15514 252 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 MTNR1AP48039 350 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 DPY19L2P1Q6NXN4 242 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 OR10AD1Q8NGE0 317 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 TRUB1Q8WWH5 349 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 LRR1Q96L50 414 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 SLC2A13Q96QE2 648 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 HRH4Q9H3N8 390 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 IL26Q9NPH9 171 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 TAS2R16Q9NYV7 291 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 FAM171A2A8MVW0 826 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 FZD9O00144 591 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 MT-ND4P03905 459 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 DIO3P55073 304 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 EVA1AQ9H8M9 152 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 USP36Q9P275 1121 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 DUSP13Q9UII6 198 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 XRCC3O43542 346 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 GPR137BO60478 399 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 CCL11P51671 97 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 ARPC5LQ9BPX5 153 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 AJAP1Q9UKB5 411 aaPredicted RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 TRAPPC13A5PLN9 417 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 MRPS14O60783 128 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 HHEXQ03014 270 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 FCRLBQ6BAA4 426 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 ENTPD2Q9Y5L3 495 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 J3QR89 54 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 ADAM23O75077 832 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 CRABP1P29762 137 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 HMGCLP35914 325 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 ZNF852Q6ZMS4 543 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 ZNF704Q6ZNC4 412 aaPredicted RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 DTD1Q8TEA8 209 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 GLTPQ9NZD2 209 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 A6NIZ1 184 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 BEST1O76090 585 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 GKP32189 559 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 NUDT1P36639 197 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 RAP1BP61224 184 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 RAP1AP62834 184 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 UBE2IP63279 158 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 SAGE1Q9NXZ1 904 aa11.34□□□□□ -0.59
PCF11-201ENST00000298281 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
PCF11-201ENST00000298281 SDHDO14521 159 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 CLDN1O95832 211 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 S1PR4O95977 384 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 OPN1LWP04000 364 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 CT45A10P0DMU9 189 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 HNF1AP20823 631 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 OMGP23515 440 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 CERS1P27544 350 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 DOC2AQ14183 400 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 ZNF425Q6IV72 752 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 XKR5Q6UX68 686 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 BEST4Q8NFU0 473 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 SCAMP4Q969E2 229 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 ELF4Q99607 663 aaPredicted RBP11.33□□□□□ -0.59
PCF11-201ENST00000298281 GPR62Q9BZJ7 368 aa11.33□□□□□ -0.59
PCF11-201ENST00000298281 NFKBIEO00221 500 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 SCAMP2O15127 329 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 HYAL4Q2M3T9 481 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 GDPGP1Q6ZNW5 385 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 CYP4V2Q6ZWL3 525 aaPredicted RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 SLC46A3Q7Z3Q1 461 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TRIM74Q86UV6 250 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 PRRC1Q96M27 445 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms