RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 VAMP2P63027 116 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 ZP2Q05996 745 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 UBE2UQ5VVX9 321 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF836Q6ZNA1 936 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CLDN22Q8N7P3 220 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 OR52I1Q8NGK6 324 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 SLC37A2Q8TED4 501 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CHPT1Q8WUD6 406 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 MAP3K3Q99759 626 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 TEX101Q9BY14 249 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 DUSP22Q9NRW4 184 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 NEU3Q9UQ49 428 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 TSPAN11A1L157 253 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CDC14CA4D256 554 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 NAP1L6A6NFF2 107 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 GPRIN2O60269 458 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 LCMT2O60294 686 aaKnown RBP15.55■□□□□ 0.08
PHRF1-201ENST00000264555 OTX2P32243 289 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 RPS5P46782 204 aaKnown RBP15.55■□□□□ 0.08
PHRF1-201ENST00000264555 HERV-K104P61576 105 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 SLC35F3Q8IY50 421 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 PMM1Q92871 262 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 ABRACLQ9P1F3 81 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 NUFIP1Q9UHK0 495 aaKnown RBP15.55■□□□□ 0.08
PHRF1-201ENST00000264555 TLCD2A6NGC4 264 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 PRSS3P35030 304 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CDKN3Q16667 212 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 ADPRMQ3LIE5 342 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 PLEKHN1Q494U1 663 aaPredicted RBP15.55■□□□□ 0.08
PHRF1-201ENST00000264555 SPIN3Q5JUX0 258 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 OR5B2Q96R09 309 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 MED20Q9H944 212 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 SACM1LQ9NTJ5 587 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 MMP17Q9ULZ9 603 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 H0Y8X5 98 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PLRG1O43660 514 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RP2O75695 350 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 CSNK1EP49674 416 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RPS25P62851 125 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RNASE10Q5GAN6 216 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 TXNL4BQ9NX01 149 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 NUBP2Q9Y5Y2 271 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 V9GY05 133 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 ASPDHA6ND91 283 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SCGNO76038 276 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RBMXP38159 391 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 FOXK2Q01167 660 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 C6orf183Q5T699 404 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 HACD4Q5VWC8 232 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 IL22RA1Q8N6P7 574 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 KIAA1958Q8N8K9 716 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PBX4Q9BYU1 374 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PLCXD1Q9NUJ7 323 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 MMACHCQ9Y4U1 282 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC16A7O60669 478 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 TEKQ02763 1124 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 AGBL4Q5VU57 503 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 DHRS4L2Q6PKH6 230 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 METAP1DQ6UB28 335 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 LINC00299Q6ZSB3 139 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 FOXRED2Q8IWF2 684 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 CMIPQ8IY22 773 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 KCTD12Q96CX2 325 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 NEDD4LQ96PU5 975 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 LMF1Q96S06 567 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC25A18Q9H1K4 315 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RDH8Q9NYR8 311 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 C19orf53Q9UNZ5 99 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 ALG5Q9Y673 324 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 I3L521 148 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SEC14L5O43304 696 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 DNAJB6O75190 326 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 ZFAND5O76080 213 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 OR2T7P0C7T2 308 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PIPP12273 146 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PVALBP20472 110 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SFTPDP35247 375 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC19A1P41440 591 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 FIP1L1Q6UN15 594 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC43A2Q8N370 569 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 OR2T27Q8NH04 317 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC6A18Q96N87 628 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SLC46A1Q96NT5 459 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PRR14Q9BWN1 585 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 CD27P26842 260 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 RACK1P63244 317 aaKnown RBP15.54■□□□□ 0.08
PHRF1-201ENST00000264555 PPP1R3BQ86XI6 285 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 KLHDC8BQ8IXV7 354 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 OR14L1PQ8NHC6 308 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 EID2BQ96D98 161 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 TMEM185BQ9H7F4 350 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 SEMA4GQ9NTN9 838 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 A3GALT2U3KPV4 340 aa15.54■□□□□ 0.08
PHRF1-201ENST00000264555 ATAD5Q96QE3 1844 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 CD3GP09693 182 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 FOLR3P41439 243 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 NKX2-5P52952 324 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 DUSP5Q16690 384 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 IQCF2Q8IXL9 164 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF587Q96SQ5 575 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms