RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 POLR3KQ9Y2Y1 108 aaPredicted RBP5.12□□□□□ -1.59
CHD2-227ENST00000637572 A0A1B0GW55 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 PRAMEF25A6NGN4 478 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 FRG2CA6NGY1 282 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 ZNF891A8MT65 544 aaPredicted RBP5.12□□□□□ -1.59
CHD2-227ENST00000637572 SULT2B1O00204 365 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 FGF17O60258 216 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 CSO75390 466 aaKnown RBP5.12□□□□□ -1.59
CHD2-227ENST00000637572 DLGAP3O95886 979 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 CH25HO95992 272 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 ZGLP1P0C6A0 271 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L2P0CJ85 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L3P0CJ86 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L4P0CJ87 422 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L5P0CJ88 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L6P0CJ89 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4L7P0CJ90 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 ERGP11308 486 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 S1PR1P21453 382 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 CDKN2CP42773 168 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 RORCP51449 518 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 PDX1P52945 283 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 CTXN1P60606 82 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 PPP1R8Q12972 351 aaKnown RBP5.12□□□□□ -1.59
CHD2-227ENST00000637572 ZNF528Q3MIS6 628 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DDI2Q5TDH0 399 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 RHBDD2Q6NTF9 364 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 FAM180BQ6P0A1 224 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 OGFOD3Q6PK18 319 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 XKR5Q6UX68 686 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 NLRC3Q7RTR2 1065 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 ZNF100Q8IYN0 542 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 UBE2J2Q8N2K1 259 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 D2HGDHQ8N465 521 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 PRSS33Q8NF86 280 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 SARGQ9BW04 601 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 CCDC86Q9H6F5 360 aaKnown RBP5.12□□□□□ -1.59
CHD2-227ENST00000637572 CENPMQ9NSP4 180 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 NKIRAS2Q9NYR9 191 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 PTTG2Q9NZH5 202 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 KCMF1Q9P0J7 381 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 DUX4Q9UBX2 424 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 NOX1Q9Y5S8 564 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 NPFFR2Q9Y5X5 522 aa5.12□□□□□ -1.59
CHD2-227ENST00000637572 A0A1B0GVI7 797 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 EME2A4GXA9 379 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 KRBA1A5PL33 1030 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 CHP2O43745 196 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ZNF883P0CG24 379 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 CD36P16671 472 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 GM2AP17900 193 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SLC35A1P78382 337 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 TGFBR3Q03167 851 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 KIAA0040Q15053 153 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ZNF57Q68EA5 555 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 GUSBP11Q6P575 273 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SHISA6Q6ZSJ9 500 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 MBOAT2Q6ZWT7 520 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SLCO6A1Q86UG4 719 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 CCDC103Q8IW40 242 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 MMP21Q8N119 569 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 OMA1Q96E52 524 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 C16orf58Q96GQ5 468 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 FAM46AQ96IP4 442 aaKnown RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 LRR1Q96L50 414 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 LRFN5Q96NI6 719 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 CLUHP3Q96NS8 147 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SLC19A3Q9BZV2 496 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ZNF768Q9H5H4 540 aaKnown RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 ELL3Q9HB65 397 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 INIPQ9NRY2 104 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 RXFP3Q9NSD7 469 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 PAQR5Q9NXK6 330 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 CNOT2Q9NZN8 540 aaKnown RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 ABCG2Q9UNQ0 655 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ASB4Q9Y574 426 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 A0A087WZY1 265 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ENO4A6NNW6 628 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 C4orf47A7E2U8 309 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 LINC01387J3KSC0 135 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 TBX1O43435 398 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 POU3F2P20265 443 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 MAOAP21397 527 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 EDNRAP25101 427 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 GGT2P36268 569 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 APOBEC1P41238 236 aaKnown RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 MTNR1AP48039 350 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 PITPNAQ00169 270 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 TIAL1Q01085 375 aaKnown RBP eCLIP5.11□□□□□ -1.59
CHD2-227ENST00000637572 ST3GAL4Q11206 333 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 RUNX2Q13950 521 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SELPLGQ14242 412 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 SEC23BQ15437 767 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 LTB4RQ15722 352 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 PRSS53Q2L4Q9 553 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 ZNF829Q3KNS6 432 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 SLC18B1Q6NT16 456 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 JMJD6Q6NYC1 403 aaPredicted RBP5.11□□□□□ -1.59
CHD2-227ENST00000637572 RASSF6Q6ZTQ3 369 aa5.11□□□□□ -1.59
CHD2-227ENST00000637572 CCDC80Q76M96 950 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms