RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 BBS10Q8TAM1 723 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 TMEM234Q8WY98 164 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 KLHL15Q96M94 604 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 ELAC2Q9BQ52 826 aaKnown RBP19.69■□□□□ 0.74
HOMER3-206ENST00000594439 TMEM38AQ9H6F2 299 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 NPDC1Q9NQX5 325 aaPredicted RBP19.69■□□□□ 0.74
HOMER3-206ENST00000594439 ARMCX1Q9P291 453 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 ZNF443Q9Y2A4 671 aaPredicted RBP19.69■□□□□ 0.74
HOMER3-206ENST00000594439 CHST2Q9Y4C5 530 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 CAPN7Q9Y6W3 813 aa19.69■□□□□ 0.74
HOMER3-206ENST00000594439 CDHR4A6H8M9 788 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 C5orf58C9J3I9 102 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 AP3D1O14617 1153 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 DVL2O14641 736 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 IL18BPO95998 194 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 BMP5P22003 454 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 SFTPDP35247 375 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 EIF1AXP47813 144 aaKnown RBP19.68■□□□□ 0.74
HOMER3-206ENST00000594439 MTPNP58546 118 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 CDK6Q00534 326 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 SELENBP1Q13228 472 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 CAPRIN1Q14444 709 aaKnown RBP19.68■□□□□ 0.74
HOMER3-206ENST00000594439 PON3Q15166 354 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 TRMT5Q32P41 509 aaKnown RBP19.68■□□□□ 0.74
HOMER3-206ENST00000594439 RNF220Q5VTB9 566 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 PLEKHM3Q6ZWE6 761 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 P4HA3Q7Z4N8 544 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 FNDC9Q8TBE3 224 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 INTS12Q96CB8 462 aaKnown RBP19.68■□□□□ 0.74
HOMER3-206ENST00000594439 RLIMQ9NVW2 624 aa19.68■□□□□ 0.74
HOMER3-206ENST00000594439 BBIP1A8MTZ0 92 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 FXYD1O00168 92 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 TNFSF11O14788 317 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 CXCL13O43927 109 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 AGFG1P52594 562 aaKnown RBP19.67■□□□□ 0.74
HOMER3-206ENST00000594439 MERTKQ12866 999 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 LARS2Q15031 903 aaKnown RBP19.67■□□□□ 0.74
HOMER3-206ENST00000594439 SGCBQ16585 318 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 REP15Q6BDI9 236 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 REEP3Q6NUK4 255 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 PTOV1Q86YD1 416 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 GCNT2Q8N0V5 402 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 CLIP4Q8N3C7 705 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 ZNF563Q8TA94 476 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 SPATA9Q9BWV2 254 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 ENKD1Q9H0I2 346 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 PAQR5Q9NXK6 330 aaPredicted RBP19.67■□□□□ 0.74
HOMER3-206ENST00000594439 ZNF232Q9UNY5 417 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 IFT52Q9Y366 437 aa19.67■□□□□ 0.74
HOMER3-206ENST00000594439 LOC100653049A0A140TA62 436 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 GMNCA6NCL1 334 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 FAAHO00519 579 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 MRASO14807 208 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 CCDC22O60826 627 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 KRT34O76011 436 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 PABPC4LP0CB38 370 aaKnown RBP19.66■□□□□ 0.74
HOMER3-206ENST00000594439 ETS2P15036 469 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 OPRM1P35372 400 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 GNGT1P63211 74 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 EPS8Q12929 822 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 SCARB2Q14108 478 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 ZSWIM7Q19AV6 140 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 TMEM176BQ3YBM2 270 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-206ENST00000594439 ZNF311Q5JNZ3 666 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 HBMQ6B0K9 141 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 OR2A2Q6IF42 318 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 ZNF440Q8IYI8 595 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 ATP6V1C2Q8NEY4 427 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 SLC39A3Q9BRY0 314 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 CCDC106Q9BWC9 280 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 SFXN3Q9BWM7 321 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 RSPO3Q9BXY4 272 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-206ENST00000594439 FAM107BQ9H098 131 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 KAT8Q9H7Z6 458 aaKnown RBP19.66■□□□□ 0.74
HOMER3-206ENST00000594439 COQ10BQ9H8M1 238 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 RNF122Q9H9V4 155 aa19.66■□□□□ 0.74
HOMER3-206ENST00000594439 PKDREJQ9NTG1 2253 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 CFAP73A6NFT4 308 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 GJE1A6NN92 205 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 AQP8O94778 261 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 IGFBP2P18065 325 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 IDH2P48735 452 aaKnown RBP19.65■□□□□ 0.74
HOMER3-206ENST00000594439 CYLC2Q14093 348 aaPredicted RBP19.65■□□□□ 0.74
HOMER3-206ENST00000594439 MMEL1Q495T6 779 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 PDSS1Q5T2R2 415 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 NANOGP8Q6NSW7 305 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 GRINAQ7Z429 371 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 NET1Q7Z628 596 aaPredicted RBP19.65■□□□□ 0.74
HOMER3-206ENST00000594439 OSTF1Q92882 214 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 LRRC58Q96CX6 371 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 SPOCK3Q9BQ16 436 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 NSRP1Q9H0G5 558 aaKnown RBP19.65■□□□□ 0.74
HOMER3-206ENST00000594439 NANOGQ9H9S0 305 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 CACYBPQ9HB71 228 aaKnown RBP19.65■□□□□ 0.74
HOMER3-206ENST00000594439 CTPS2Q9NRF8 586 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 JKAMPQ9P055 326 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 UNC79Q9P2D8 2635 aa19.65■□□□□ 0.74
HOMER3-206ENST00000594439 A0A1W2PNV4 684 aa19.64■□□□□ 0.73
HOMER3-206ENST00000594439 HNRNPRO43390 633 aaKnown RBP19.64■□□□□ 0.73
HOMER3-206ENST00000594439 SNX3O60493 162 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms