RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NRG3P56975 720 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 CCL7P80098 99 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 BDH1Q02338 343 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 POU4F2Q12837 409 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 GPR50Q13585 617 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 EFR3AQ14156 821 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 IL11RAQ14626 422 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 EBPQ15125 230 aaKnown RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF404Q494X3 552 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 FNDC7Q5VTL7 733 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ARHGAP11AQ6P4F7 1023 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 SLC23A3Q6PIS1 610 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 WDR88Q6ZMY6 472 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF574Q6ZN55 896 aaPredicted RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 MEPCEQ7L2J0 689 aaKnown RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 CXXC5Q7LFL8 322 aaKnown RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 OAFQ86UD1 273 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 EGFL6Q8IUX8 553 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 CADM2Q8N3J6 435 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZSCAN1Q8NBB4 408 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 OR6Q1Q8NGQ2 317 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 OR4C3Q8NH37 302 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 OR52N1Q8NH53 320 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 METTL21AQ8WXB1 218 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 TSLPQ969D9 159 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 SH3YL1Q96HL8 342 aaPredicted RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 VN1R1Q9GZP7 353 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 HAO2Q9NYQ3 351 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 C19orf25Q9UFG5 118 aaPredicted RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 STUB1Q9UNE7 303 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 U3KQA8 63 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ABCA7Q8IZY2 2146 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 CEP192Q8TEP8 1941 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NINQ8N4C6 2090 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 SETXQ7Z333 2677 aaKnown RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 SPAG17Q6Q759 2223 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 IGHV5-10-1A0A0J9YXX1 117 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 A0A1W2PQM1 296 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 A8MUA0 341 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ALG1L2C9J202 215 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PRR23D1E9PI22 279 aaPredicted RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 IMPA2O14732 288 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 REM1O75628 298 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 SCRG1O75711 98 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 UTS2O95399 124 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 IGHA1P01876 353 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 HEXBP07686 556 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ZGLP1P0C6A0 271 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ZNF883P0CG24 379 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PRR23D2P0DMB1 279 aaPredicted RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 GAAP10253 952 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 FGF5P12034 268 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 CPEP16870 476 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ZNF3P17036 446 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NAGAP17050 411 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 GADD45AP24522 165 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ATP6V1E1P36543 226 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 BMXP51813 675 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NCS1P62166 190 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 DAB2P98082 770 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PLAURQ03405 335 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 CRYZQ08257 329 aaKnown RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 LGALS3BPQ08380 585 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 TPBGQ13641 420 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 TSTQ16762 297 aaKnown RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 NKAIN1Q4KMZ8 207 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 VWA2Q5GFL6 755 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 HSDL2Q6YN16 418 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 TMPRSS11AQ6ZMR5 421 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 DPY19L2P2Q6ZN68 376 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 OVCH1Q7RTY7 1134 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ATCAYQ86WG3 371 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PPP1R3BQ86XI6 285 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 KLHL36Q8N4N3 616 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 OR5L2Q8NGL0 311 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PFN4Q8NHR9 129 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NUBPLQ8TB37 319 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NDNFQ8TB73 568 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 STT3BQ8TCJ2 826 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 PHOSPHO1Q8TCT1 267 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 GRHL3Q8TE85 626 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.54□□□□□ -0.88
VPS25-203ENST00000589520 OPALINQ96PE5 141 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 OR5M11Q96RB7 305 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 IFT27Q9BW83 186 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 NUDT9Q9BW91 350 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 SEMA4CQ9C0C4 833 aa9.54□□□□□ -0.88
VPS25-203ENST00000589520 WWTR1Q9GZV5 400 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms