RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CRYGSP22914 178 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 RYKP34925 604 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 PCYT1AP49585 367 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 IDH3AP50213 366 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 CHRNEQ04844 493 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 FUT5Q11128 374 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 MERTKQ12866 999 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 RNPS1Q15287 305 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 GSTA3Q16772 222 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 ALKBH2Q6NS38 261 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 C3orf33Q6P1S2 294 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 DNAJC14Q6Y2X3 702 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 FRRS1Q6ZNA5 592 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 FCRLAQ7L513 359 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 MED12LQ86YW9 2145 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 CKAP2Q8WWK9 683 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 TMEM234Q8WY98 164 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 THOC1Q96FV9 657 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 EBF4Q9BQW3 602 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 COQ10BQ9H8M1 238 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 SERINC1Q9NRX5 453 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF446Q9NWS9 450 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 SLC35A3Q9Y2D2 325 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 DEFB108AA8MXU0 73 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 HMGN4O00479 90 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 RFXANKO14593 260 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 PRKD3O94806 890 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ANP32DO95626 131 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 NTN1O95631 604 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ENPP1P22413 925 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 PGM1P36871 562 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 AQP5P55064 265 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 SESN3P58005 492 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 SYPL1Q16563 259 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 DEFB113Q30KQ7 82 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ANKFN1Q8N957 763 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 GLB1L3Q8NCI6 653 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ST8SIA1Q92185 356 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 VPS33AQ96AX1 596 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ZG16BQ96DA0 208 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ALPK1Q96QP1 1244 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 CXXC4Q9H2H0 198 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 TCF7L2Q9NQB0 619 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 SDR39U1Q9NRG7 319 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC6A13Q9NSD5 602 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ZIM2Q9NZV7 527 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 HRNRQ86YZ3 2850 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 CELSR1Q9NYQ6 3014 aa11.33□□□□□ -0.6
NPLOC4-213ENST00000573519 ANKHD1Q8IWZ3 2542 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 PRAMEF27A3QJZ7 478 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 SIAH2O43255 324 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 KRT75O95678 551 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 IL6P05231 212 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 GUSBP08236 651 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 NR2F1P10589 423 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 TFPIP10646 304 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 CD99P14209 185 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 POLR2JP52435 117 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 KCNJ10P78508 379 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 GTDC1Q4AE62 458 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 COX20Q5RI15 118 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 STAC2Q6ZMT1 411 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 C22orf34Q6ZV56 151 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 PLEKHM3Q6ZWE6 761 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 WFDC8Q8IUA0 241 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 MIER2Q8N344 545 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 ARFGAP2Q8N6H7 521 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 MBD6Q96DN6 1003 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 DNAJA3Q96EY1 480 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 MAGEB18Q96M61 343 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 ACTR6Q9GZN1 396 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 SAP130Q9H0E3 1048 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 ACER3Q9NUN7 267 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 LIPT1Q9Y234 373 aa11.32□□□□□ -0.6
NPLOC4-213ENST00000573519 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 SULT2B1O00204 365 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 TGDSO95455 350 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 YES1P07947 543 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CHRM4P08173 479 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 PPP3CBP16298 524 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 KLK2P20151 261 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CCNA2P20248 432 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 APOBEC1P41238 236 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CRATP43155 626 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms