RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GPR143P51810 404 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 EFNA3P52797 238 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 MAMSTRQ6ZN01 415 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF440Q8IYI8 595 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 CENPSQ8N2Z9 138 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 PSD4Q8NDX1 1056 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 C7orf57Q8NEG2 295 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 B4GALNT2Q8NHY0 566 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 DNAJA4Q8WW22 397 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF501Q96CX3 271 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 NECAB3Q96P71 396 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF649Q9BS31 505 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 JAM3Q9BX67 310 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 NXF5Q9H1B4 397 aaKnown RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 PI4KAP42356 2102 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 HOXA6P31267 233 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 S100A5P33763 92 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 CD79BP40259 229 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 PPP5CP53041 499 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 COPZ1P61923 177 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ATP1A4Q13733 1029 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 VWA2Q5GFL6 755 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ARHGAP40Q5TG30 622 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 YOD1Q5VVQ6 348 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 MEPCEQ7L2J0 689 aaKnown RBP16.66■□□□□ 0.26
SMPD3-211ENST00000568373 SLITRK4Q8IW52 837 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 SLC43A2Q8N370 569 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF527Q8NB42 609 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF721Q8TF20 911 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 COX4I2Q96KJ9 171 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 TNFRSF13CQ96RJ3 184 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 DPYSL5Q9BPU6 564 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 FAIMQ9NVQ4 179 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 GALNT8Q9NY28 637 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 TNFRSF10DQ9UBN6 386 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 BAIAP2Q9UQB8 552 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 FER1L5A0AVI2 2057 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ADAMTS20P59510 1910 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 A0A087WUJ7 227 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 FRG2CA6NGY1 282 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 J3QRE1 110 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 TAF4O00268 1085 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 PFDN1O60925 122 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 CD40LGP29965 261 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 ADH7P40394 386 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 FHL1Q13642 323 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 PLK5Q496M5 336 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 FNDC7Q5VTL7 733 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 C1orf189Q5VU69 101 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 TUBA3EQ6PEY2 450 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 GATAD2AQ86YP4 633 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 SIRT6Q8N6T7 355 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 OR4C6Q8NH72 309 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 UFD1Q92890 307 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 NACC2Q96BF6 587 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 LCORQ96JN0 433 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 SECISBP2Q96T21 854 aaKnown RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 MED20Q9H944 212 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 SIAEQ9HAT2 523 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 MCCC2Q9HCC0 563 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 MKKSQ9NPJ1 570 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 ERVK13-1Q9NX77 482 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 PEX16Q9Y5Y5 336 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 HPGDP15428 266 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 PAICSP22234 425 aaKnown RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 RPS19P39019 145 aaKnown RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 IFITM3Q01628 133 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 NSDHLQ15738 373 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 KLHL36Q8N4N3 616 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 OR51G2Q8NGK0 314 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 ABTB1Q969K4 478 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 ADIPOR1Q96A54 375 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 DUSP23Q9BVJ7 150 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 HCAR1Q9BXC0 346 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 NUAK2Q9H093 628 aa16.65■□□□□ 0.26
SMPD3-211ENST00000568373 TXNL4BQ9NX01 149 aaKnown RBP16.65■□□□□ 0.26
SMPD3-211ENST00000568373 COL5A1P20908 1838 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 PNMA8CA0A1B0GUJ8 204 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 RIIAD1A6NNX1 92 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 PRR23D1E9PI22 279 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 GNB5O14775 395 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 TOX3O15405 576 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 PPP1R3DO95685 299 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 PRR23D2P0DMB1 279 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 SLC6A6P31641 620 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 CD226Q15762 336 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF362Q5T0B9 420 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-211ENST00000568373 ARMC4Q5T2S8 1044 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 KANSL1Q7Z3B3 1105 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 SNX29P2Q8IUI4 249 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 GATSQ8NAP1 163 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 SLC37A3Q8NCC5 494 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 OR52N1Q8NH53 320 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 PTP4A1Q93096 173 aa16.64■□□□□ 0.25
SMPD3-211ENST00000568373 TMEM203Q969S6 136 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms