RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 OR52N1Q8NH53 320 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MFSD8Q8NHS3 518 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 STACQ99469 402 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ELF4Q99607 663 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HDAC8Q9BY41 377 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CDH20Q9HBT6 801 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ICKQ9UPZ9 632 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 A0A1W2PPH5 198 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GAPDHSO14556 408 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SHOXO15266 292 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SLC16A6O15403 523 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 METTL15P1P0C7V9 234 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GCH1P30793 250 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ENTPD1P49961 510 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 FCRL6Q6DN72 434 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 NADSYN1Q6IA69 706 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TANGO2Q6ICL3 276 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 EGFL6Q8IUX8 553 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 B3GNT7Q8NFL0 401 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OR51G2Q8NGK0 314 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OR14L1PQ8NHC6 308 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ARPC5LQ9BPX5 153 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ZFYVE21Q9BQ24 234 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SLC38A1Q9H2H9 487 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OR51J1Q9H342 316 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CHST11Q9NPF2 352 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 C1orf123Q9NWV4 160 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 EBF1Q9UH73 591 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MMACHCQ9Y4U1 282 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM184BQ9Y519 407 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HS3ST3A1Q9Y663 406 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MROH6A6NGR9 719 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 H0YIV9 168 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 UBFD1O14562 309 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 RAD1O60671 282 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TPST2O60704 377 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 LEFTY1O75610 366 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ALDOBP05062 364 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CR2P20023 1033 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 IDUAP35475 653 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 MSMO1Q15800 293 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 YIF1BQ5BJH7 314 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 HBMQ6B0K9 141 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 LEG1Q6P5S2 330 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 B3GNT8Q7Z7M8 397 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 GLB1L2Q8IW92 636 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SVBPQ8N300 66 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ABHD11Q8NFV4 315 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 OR5D14Q8NGL3 314 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM19Q96HH6 336 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 LRR1Q96L50 414 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 FIZ1Q96SL8 496 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 BARD1Q99728 777 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SMG9Q9H0W8 520 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC17A6Q9P2U8 582 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PPT2Q9UMR5 302 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 FARSAQ9Y285 508 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 MBLAC1A4D2B0 266 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NARSO43776 548 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 B3GALNT1O75752 331 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ITGB2P05107 769 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CSN2P05814 226 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ZNF35P13682 527 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 OPRD1P41143 372 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TSPAN31Q12999 210 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 EIF2B1Q14232 305 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PLK5Q496M5 336 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCTD11Q693B1 232 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 C22orf42Q6IC83 251 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 FAM199XQ6PEV8 388 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CREB3L2Q70SY1 520 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 GRAMD2AQ8IUY3 354 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ADGRG5Q8IZF4 528 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ACOT11Q8WXI4 607 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 BOD1Q96IK1 185 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DNTTIP1Q9H147 329 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 C12orf10Q9HB07 376 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SCPEP1Q9HB40 452 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCNG2Q9UJ96 466 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CAMK2AQ9UQM7 478 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCTD3Q9Y597 815 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DNAJC15Q9Y5T4 150 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 A0A1B0GUH1 482 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 IQCMA0A1B0GVH7 501 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 F5H0A9 414 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 J3QKU1 62 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SAP18O00422 153 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NME4O00746 187 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 STC2O76061 302 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CRYZL1O95825 349 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NAGAP17050 411 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PRPH2P23942 346 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 AK4P27144 223 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 MSX1P28360 303 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 HTR2BP41595 481 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CCR5P51681 352 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TECPR1Q7Z6L1 1165 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ST7LQ8TDW4 575 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PTERQ96BW5 349 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 FCRL1Q96LA6 429 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms